Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3MS9

ABL kinase in complex with imatinib and a fragment (FRAG1) in the myristate pocket

Functional Information from GO Data
ChainGOidnamespacecontents
A0004672molecular_functionprotein kinase activity
A0004713molecular_functionprotein tyrosine kinase activity
A0005524molecular_functionATP binding
A0006468biological_processprotein phosphorylation
B0004672molecular_functionprotein kinase activity
B0004713molecular_functionprotein tyrosine kinase activity
B0005524molecular_functionATP binding
B0006468biological_processprotein phosphorylation
Functional Information from PDB Data
site_idAC1
Number of Residues16
DetailsBINDING SITE FOR RESIDUE STI A 1
ChainResidue
AHOH75
AMET318
AILE360
AHIS361
ALEU370
AALA380
AASP381
APHE382
AVAL256
AALA269
ALYS271
AGLU286
AMET290
AILE293
AVAL299
ATHR315

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MS9 A 516
ChainResidue
AHOH44
AALA337
ALEU341
ALEU429
AALA433
AGLY463
APRO465

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 2
ChainResidue
AHOH131
AILE360
AHOH535
AHOH594

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 4
ChainResidue
ATHR319
AGLY372

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 5
ChainResidue
ATYR253
AGLY321
AASN322

site_idAC6
Number of Residues16
DetailsBINDING SITE FOR RESIDUE STI B 1
ChainResidue
BHOH165
BALA269
BLYS271
BGLU286
BMET290
BVAL299
BILE313
BTHR315
BPHE317
BMET318
BILE360
BHIS361
BARG362
BALA380
BASP381
BPHE382

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MS9 B 516
ChainResidue
BALA337
BLEU341
BLEU429
BILE432
BALA433
BGLY463
BPRO465

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL B 3
ChainResidue
BHOH151
BHOH214
BPHE359
BILE360

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 6
ChainResidue
BTYR253
BGLY321
BASN322

Functional Information from PROSITE/UniProt
site_idPS00107
Number of Residues24
DetailsPROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. LGGGQYGEVYeGvwkkyslt..........VAVK
ChainResidueDetails
ALEU248-LYS271

site_idPS00109
Number of Residues13
DetailsPROTEIN_KINASE_TYR Tyrosine protein kinases specific active-site signature. FIHrDLAARNCLV
ChainResidueDetails
APHE359-VAL371

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000255|PROSITE-ProRule:PRU10028
ChainResidueDetails
AASP363
BASP363

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000305
ChainResidueDetails
BLEU248
BGLU316
ALEU248
AGLU316

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00159
ChainResidueDetails
ALYS271
BLYS271

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:P42684
ChainResidueDetails
ASER229
BSER229

site_idSWS_FT_FI5
Number of Residues6
DetailsMOD_RES: Phosphotyrosine => ECO:0000250|UniProtKB:P00519
ChainResidueDetails
ATYR253
ATYR257
ATYR413
BTYR253
BTYR257
BTYR413

site_idSWS_FT_FI6
Number of Residues2
DetailsMOD_RES: Phosphotyrosine; by autocatalysis and SRC-type Tyr-kinases => ECO:0000269|PubMed:10988075, ECO:0000269|PubMed:12748290
ChainResidueDetails
ATYR393
BTYR393

site_idSWS_FT_FI7
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0000269|PubMed:9109492
ChainResidueDetails
ASER446
BSER446

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon