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3MLN

DNA binding domain of Early B-cell Factor 1 (Ebf1) bound to DNA (crystal form II)

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0006355biological_processregulation of DNA-templated transcription
B0003677molecular_functionDNA binding
B0006355biological_processregulation of DNA-templated transcription
E0003677molecular_functionDNA binding
E0006355biological_processregulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 501
ChainResidue
AHIS157
ACYS161
ACYS164
ACYS170

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 501
ChainResidue
BHIS157
BCYS161
BCYS164
BCYS170

Functional Information from PROSITE/UniProt
site_idPS01345
Number of Residues10
DetailsCOE COE family signature. CSRCCDKKSC
ChainResidueDetails
ACYS161-CYS170

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues38
DetailsZinc finger: {"description":"C5-type","evidences":[{"source":"PubMed","id":"20876732","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3MLN","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3MLO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3MLP","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues29
DetailsRegion: {"description":"Interaction with DNA","evidences":[{"source":"PubMed","id":"20876732","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3MLN","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3MLO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3MLP","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues4
DetailsSite: {"description":"Interaction with DNA","evidences":[{"source":"PubMed","id":"20876732","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3MLN","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3MLO","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3MLP","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

243083

PDB entries from 2025-10-15

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