3M8Y
Phosphopentomutase from Bacillus cereus after glucose-1,6-bisphosphate activation
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000287 | molecular_function | magnesium ion binding |
| A | 0003824 | molecular_function | catalytic activity |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005829 | cellular_component | cytosol |
| A | 0006015 | biological_process | 5-phosphoribose 1-diphosphate biosynthetic process |
| A | 0006018 | biological_process | 2-deoxyribose 1-phosphate catabolic process |
| A | 0008973 | molecular_function | phosphopentomutase activity |
| A | 0009117 | biological_process | nucleotide metabolic process |
| A | 0016853 | molecular_function | isomerase activity |
| A | 0030145 | molecular_function | manganese ion binding |
| A | 0043094 | biological_process | metabolic compound salvage |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0000287 | molecular_function | magnesium ion binding |
| B | 0003824 | molecular_function | catalytic activity |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005829 | cellular_component | cytosol |
| B | 0006015 | biological_process | 5-phosphoribose 1-diphosphate biosynthetic process |
| B | 0006018 | biological_process | 2-deoxyribose 1-phosphate catabolic process |
| B | 0008973 | molecular_function | phosphopentomutase activity |
| B | 0009117 | biological_process | nucleotide metabolic process |
| B | 0016853 | molecular_function | isomerase activity |
| B | 0030145 | molecular_function | manganese ion binding |
| B | 0043094 | biological_process | metabolic compound salvage |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0000287 | molecular_function | magnesium ion binding |
| C | 0003824 | molecular_function | catalytic activity |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0005829 | cellular_component | cytosol |
| C | 0006015 | biological_process | 5-phosphoribose 1-diphosphate biosynthetic process |
| C | 0006018 | biological_process | 2-deoxyribose 1-phosphate catabolic process |
| C | 0008973 | molecular_function | phosphopentomutase activity |
| C | 0009117 | biological_process | nucleotide metabolic process |
| C | 0016853 | molecular_function | isomerase activity |
| C | 0030145 | molecular_function | manganese ion binding |
| C | 0043094 | biological_process | metabolic compound salvage |
| C | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MN A 395 |
| Chain | Residue |
| A | TPO85 |
| A | ASP156 |
| A | ASP286 |
| A | HIS291 |
| A | HIS339 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MN A 396 |
| Chain | Residue |
| A | ASP13 |
| A | TPO85 |
| A | ASP327 |
| A | HIS328 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MN A 397 |
| Chain | Residue |
| A | GLY27 |
| A | ASP28 |
| A | HIS334 |
| A | HOH534 |
| A | HOH680 |
| A | HOH681 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ACT A 398 |
| Chain | Residue |
| A | PRO351 |
| A | LYS354 |
| A | HOH443 |
| A | HOH559 |
| site_id | AC5 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE ACT A 399 |
| Chain | Residue |
| A | THR74 |
| A | GLU359 |
| A | LEU360 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL A 400 |
| Chain | Residue |
| A | GLY18 |
| A | GLU19 |
| A | GLY30 |
| A | SER31 |
| A | HOH451 |
| site_id | AC7 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL A 401 |
| Chain | Residue |
| A | LEU362 |
| A | ARG363 |
| A | GLN364 |
| A | ASP368 |
| A | HOH460 |
| site_id | AC8 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE GOL A 402 |
| Chain | Residue |
| A | LYS3 |
| A | GLU318 |
| A | SER352 |
| A | HOH753 |
| site_id | AC9 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE TRS A 403 |
| Chain | Residue |
| A | TYR96 |
| A | HOH567 |
| A | HOH658 |
| site_id | BC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MN B 395 |
| Chain | Residue |
| B | TPO85 |
| B | ASP156 |
| B | ASP286 |
| B | HIS291 |
| B | HIS339 |
| site_id | BC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MN B 396 |
| Chain | Residue |
| B | ASP13 |
| B | TPO85 |
| B | ASP327 |
| B | HIS328 |
| site_id | BC3 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MN B 397 |
| Chain | Residue |
| B | HOH541 |
| B | HOH615 |
| site_id | BC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MN B 398 |
| Chain | Residue |
| B | GLY27 |
| B | ASP28 |
| B | HIS334 |
| B | HOH411 |
| B | HOH621 |
| B | HOH755 |
| site_id | BC5 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE ACT B 399 |
| Chain | Residue |
| B | ARG6 |
| B | LEU270 |
| B | ASN271 |
| B | MET272 |
| B | ASP273 |
| B | LYS317 |
| B | HOH661 |
| B | HOH712 |
| site_id | BC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ACT B 400 |
| Chain | Residue |
| B | ASP114 |
| B | GLU117 |
| B | ILE124 |
| B | HOH633 |
| site_id | BC7 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL B 401 |
| Chain | Residue |
| B | ASP264 |
| B | HOH483 |
| B | HOH501 |
| B | HOH631 |
| B | HOH750 |
| site_id | BC8 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL B 402 |
| Chain | Residue |
| A | TYR174 |
| A | ASN211 |
| A | HIS213 |
| B | THR120 |
| B | GLY121 |
| B | ARG122 |
| B | HOH682 |
| site_id | BC9 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL B 403 |
| Chain | Residue |
| B | ASP234 |
| B | GLU252 |
| B | ASP273 |
| B | HOH471 |
| C | ASN211 |
| C | ARG212 |
| site_id | CC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MN C 395 |
| Chain | Residue |
| C | TPO85 |
| C | ASP156 |
| C | ASP286 |
| C | HIS291 |
| C | HIS339 |
| site_id | CC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MN C 396 |
| Chain | Residue |
| C | ASP13 |
| C | TPO85 |
| C | ASP327 |
| C | HIS328 |
| site_id | CC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MN C 397 |
| Chain | Residue |
| C | HOH477 |
| C | HOH708 |
| C | GLY27 |
| C | ASP28 |
| C | HIS334 |
| C | HOH431 |
| site_id | CC4 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE ACT C 398 |
| Chain | Residue |
| A | GLU39 |
| C | ASP171 |
| C | GLU172 |
| site_id | CC5 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE TRS C 399 |
| Chain | Residue |
| C | ASP214 |
| C | ASP243 |
| C | ARG255 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 18 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00740","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
