3M8Y
Phosphopentomutase from Bacillus cereus after glucose-1,6-bisphosphate activation
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000287 | molecular_function | magnesium ion binding |
A | 0003824 | molecular_function | catalytic activity |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0006015 | biological_process | 5-phosphoribose 1-diphosphate biosynthetic process |
A | 0006018 | biological_process | 2-deoxyribose 1-phosphate catabolic process |
A | 0008973 | molecular_function | phosphopentomutase activity |
A | 0009117 | biological_process | nucleotide metabolic process |
A | 0016853 | molecular_function | isomerase activity |
A | 0030145 | molecular_function | manganese ion binding |
A | 0043094 | biological_process | cellular metabolic compound salvage |
A | 0046872 | molecular_function | metal ion binding |
B | 0000287 | molecular_function | magnesium ion binding |
B | 0003824 | molecular_function | catalytic activity |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0006015 | biological_process | 5-phosphoribose 1-diphosphate biosynthetic process |
B | 0006018 | biological_process | 2-deoxyribose 1-phosphate catabolic process |
B | 0008973 | molecular_function | phosphopentomutase activity |
B | 0009117 | biological_process | nucleotide metabolic process |
B | 0016853 | molecular_function | isomerase activity |
B | 0030145 | molecular_function | manganese ion binding |
B | 0043094 | biological_process | cellular metabolic compound salvage |
B | 0046872 | molecular_function | metal ion binding |
C | 0000287 | molecular_function | magnesium ion binding |
C | 0003824 | molecular_function | catalytic activity |
C | 0005737 | cellular_component | cytoplasm |
C | 0005829 | cellular_component | cytosol |
C | 0006015 | biological_process | 5-phosphoribose 1-diphosphate biosynthetic process |
C | 0006018 | biological_process | 2-deoxyribose 1-phosphate catabolic process |
C | 0008973 | molecular_function | phosphopentomutase activity |
C | 0009117 | biological_process | nucleotide metabolic process |
C | 0016853 | molecular_function | isomerase activity |
C | 0030145 | molecular_function | manganese ion binding |
C | 0043094 | biological_process | cellular metabolic compound salvage |
C | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MN A 395 |
Chain | Residue |
A | TPO85 |
A | ASP156 |
A | ASP286 |
A | HIS291 |
A | HIS339 |
site_id | AC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MN A 396 |
Chain | Residue |
A | ASP13 |
A | TPO85 |
A | ASP327 |
A | HIS328 |
site_id | AC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MN A 397 |
Chain | Residue |
A | GLY27 |
A | ASP28 |
A | HIS334 |
A | HOH534 |
A | HOH680 |
A | HOH681 |
site_id | AC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ACT A 398 |
Chain | Residue |
A | PRO351 |
A | LYS354 |
A | HOH443 |
A | HOH559 |
site_id | AC5 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE ACT A 399 |
Chain | Residue |
A | THR74 |
A | GLU359 |
A | LEU360 |
site_id | AC6 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL A 400 |
Chain | Residue |
A | GLY18 |
A | GLU19 |
A | GLY30 |
A | SER31 |
A | HOH451 |
site_id | AC7 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL A 401 |
Chain | Residue |
A | LEU362 |
A | ARG363 |
A | GLN364 |
A | ASP368 |
A | HOH460 |
site_id | AC8 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL A 402 |
Chain | Residue |
A | LYS3 |
A | GLU318 |
A | SER352 |
A | HOH753 |
site_id | AC9 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE TRS A 403 |
Chain | Residue |
A | TYR96 |
A | HOH567 |
A | HOH658 |
site_id | BC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MN B 395 |
Chain | Residue |
B | TPO85 |
B | ASP156 |
B | ASP286 |
B | HIS291 |
B | HIS339 |
site_id | BC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MN B 396 |
Chain | Residue |
B | ASP13 |
B | TPO85 |
B | ASP327 |
B | HIS328 |
site_id | BC3 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MN B 397 |
Chain | Residue |
B | HOH541 |
B | HOH615 |
site_id | BC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MN B 398 |
Chain | Residue |
B | GLY27 |
B | ASP28 |
B | HIS334 |
B | HOH411 |
B | HOH621 |
B | HOH755 |
site_id | BC5 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE ACT B 399 |
Chain | Residue |
B | ARG6 |
B | LEU270 |
B | ASN271 |
B | MET272 |
B | ASP273 |
B | LYS317 |
B | HOH661 |
B | HOH712 |
site_id | BC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ACT B 400 |
Chain | Residue |
B | ASP114 |
B | GLU117 |
B | ILE124 |
B | HOH633 |
site_id | BC7 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL B 401 |
Chain | Residue |
B | ASP264 |
B | HOH483 |
B | HOH501 |
B | HOH631 |
B | HOH750 |
site_id | BC8 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL B 402 |
Chain | Residue |
A | TYR174 |
A | ASN211 |
A | HIS213 |
B | THR120 |
B | GLY121 |
B | ARG122 |
B | HOH682 |
site_id | BC9 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL B 403 |
Chain | Residue |
B | ASP234 |
B | GLU252 |
B | ASP273 |
B | HOH471 |
C | ASN211 |
C | ARG212 |
site_id | CC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MN C 395 |
Chain | Residue |
C | TPO85 |
C | ASP156 |
C | ASP286 |
C | HIS291 |
C | HIS339 |
site_id | CC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MN C 396 |
Chain | Residue |
C | ASP13 |
C | TPO85 |
C | ASP327 |
C | HIS328 |
site_id | CC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MN C 397 |
Chain | Residue |
C | HOH477 |
C | HOH708 |
C | GLY27 |
C | ASP28 |
C | HIS334 |
C | HOH431 |
site_id | CC4 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE ACT C 398 |
Chain | Residue |
A | GLU39 |
C | ASP171 |
C | GLU172 |
site_id | CC5 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE TRS C 399 |
Chain | Residue |
C | ASP214 |
C | ASP243 |
C | ARG255 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 18 |
Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00740 |
Chain | Residue | Details |
A | ASP13 | |
B | ASP327 | |
B | HIS328 | |
B | HIS339 | |
C | ASP13 | |
C | ASP286 | |
C | HIS291 | |
C | ASP327 | |
C | HIS328 | |
C | HIS339 | |
A | ASP286 | |
A | HIS291 | |
A | ASP327 | |
A | HIS328 | |
A | HIS339 | |
B | ASP13 | |
B | ASP286 | |
B | HIS291 |