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3M6W

Multi-site-specific 16S rRNA methyltransferase RsmF from Thermus thermophilus in space group P21212 in complex with S-Adenosyl-L-Methionine

Functional Information from GO Data
ChainGOidnamespacecontents
A0000470biological_processmaturation of LSU-rRNA
A0001510biological_processRNA methylation
A0003723molecular_functionRNA binding
A0005737cellular_componentcytoplasm
A0006364biological_processrRNA processing
A0008168molecular_functionmethyltransferase activity
A0008173molecular_functionRNA methyltransferase activity
A0009383molecular_functionrRNA (cytosine-C5-)-methyltransferase activity
A0016428molecular_functiontRNA (cytidine-5-)-methyltransferase activity
A0030488biological_processtRNA methylation
A0032259biological_processmethylation
A0070475biological_processrRNA base methylation
Functional Information from PDB Data
site_idAC1
Number of Residues23
DetailsBINDING SITE FOR RESIDUE SAM A 465
ChainResidue
AALA109
AARG138
AASP177
AALA178
APRO179
ALEU211
AHOH476
AHOH541
AHOH837
AHOH869
AHOH991
AALA110
AHOH1201
AHOH1207
AHOH1223
AHOH1242
AALA111
APRO112
AGLY113
AGLY114
ALYS115
AGLU133
AVAL134

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL A 466
ChainResidue
AARG71
APRO72
AGLY73
AHOH542
AHOH1260

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Nucleophile => ECO:0000255|PROSITE-ProRule:PRU01023
ChainResidueDetails
ACYS230

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:20558545
ChainResidueDetails
AALA109
AGLU133
AARG138
AASP177

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PDB entries from 2024-05-01

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