Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3M6Q

Crystal structure of Arabidopsis thaliana peptide deformylase 1B (AtPDF1B) G41Q mutant in complex with actinonin

Functional Information from GO Data
ChainGOidnamespacecontents
A0042586molecular_functionpeptide deformylase activity
Functional Information from PDB Data
site_idAC1
Number of Residues16
DetailsBINDING SITE FOR RESIDUE BB2 A 194
ChainResidue
AASP40
ALEU92
ATYR98
AILE130
AHIS133
AGLU134
AHIS137
AZN195
AGLN41
AILE42
AGLY43
AGLN48
APHE87
AASP88
AGLY90
ACYS91

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN A 195
ChainResidue
AGLN48
ACYS91
AHIS133
AHIS137
ABB2194

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 196
ChainResidue
ALYS38
AASP40
AGLU63
AHOH311

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 197
ChainResidue
AGLU66
AGLU160
AGLU179
AZN199

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN A 198
ChainResidue
AASP30
AASP34
AGLU69

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 199
ChainResidue
AMET1
AGLU157
AGLU160
AZN197

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues15
DetailsCompositional bias: {"description":"Basic and acidic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsActive site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues3
DetailsBinding site: {}
ChainResidueDetails

246905

PDB entries from 2025-12-31

PDB statisticsPDBj update infoContact PDBjnumon