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3M6O

Crystal structure of Arabidopsis thaliana peptide deformylase 1B (AtPDF1B)

Functional Information from GO Data
ChainGOidnamespacecontents
A0042586molecular_functionpeptide deformylase activity
B0042586molecular_functionpeptide deformylase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN A 194
ChainResidue
AGLN48
ACYS91
AHIS133
AHIS137
AZN195
AHOH504

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN A 195
ChainResidue
AHOH263
AHOH504
AGLN48
AGLU134
AZN194

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN A 196
ChainResidue
AASP40
AGLU63
AHOH226

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 197
ChainResidue
AMET1
AGLU160
AGLU179
BGLU66

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN A 198
ChainResidue
AASP30
AASP34
AZN199
BASP30
BASP34
BZN198

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 199
ChainResidue
AGLU69
AZN198
BASP30
BASP34

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN B 194
ChainResidue
BGLN48
BCYS91
BHIS133
BHIS137
BZN195
BHOH505

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN B 195
ChainResidue
BGLN48
BGLU134
BZN194
BHOH236
BHOH505

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 196
ChainResidue
BASP40
BGLU63
BHOH238
BHOH480

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 197
ChainResidue
AGLU66
BMET1
BGLU160
BGLU179

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 198
ChainResidue
AASP30
AASP34
AZN198
BGLU69

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: ACT_SITE => ECO:0000250
ChainResidueDetails
AGLU134
BGLU134

site_idSWS_FT_FI2
Number of Residues6
DetailsBINDING:
ChainResidueDetails
ACYS91
AHIS133
AHIS137
BCYS91
BHIS133
BHIS137

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PDB entries from 2024-11-06

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