Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3M5A

SET7/9 Y245A in complex with TAF10-K189me3 peptide and AdoHcy

Functional Information from GO Data
ChainGOidnamespacecontents
A0005694cellular_componentchromosome
A0006355biological_processregulation of DNA-templated transcription
A0016279molecular_functionprotein-lysine N-methyltransferase activity
A0140945molecular_functionhistone H3K4 monomethyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues16
DetailsBINDING SITE FOR RESIDUE SAH A 1
ChainResidue
AHOH14
AASN296
AHIS297
ATYR335
ATRP352
AGLU356
AHOH412
AHOH423
AHOH61
AHOH96
AALA226
AGLU228
AGLY264
AASN265
AHIS293
ALYS294

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CO A 367
ChainResidue
AGLU351
ATRP352

site_idAC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CO A 3
ChainResidue
AALA324

site_idAC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CO A 4
ChainResidue
ATHR175

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CO A 8
ChainResidue
AHIS116
AHIS283

site_idAC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 368
ChainResidue
AHOH22
AHOH76
AGLY131
ATYR156
AARG179
APRO180
AGOL369

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 369
ChainResidue
AHOH30
ATYR156
AHIS181
APHE182
AGOL368

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 370
ChainResidue
AHOH9
AGLY141
AGLU142
ALYS143
AILE144
AHOH390

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: N6,N6,N6-trimethyllysine; alternate => ECO:0000269|PubMed:15099517, ECO:0000269|PubMed:16415881, ECO:0000269|PubMed:25959397
ChainResidueDetails
BM3L189
AASN296
AHIS297

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00190, ECO:0000269|PubMed:12514135, ECO:0000269|PubMed:12540855
ChainResidueDetails
AGLU356

site_idSWS_FT_FI3
Number of Residues5
DetailsSITE: Histone H3K4 binding => ECO:0000269|PubMed:12540855
ChainResidueDetails
AALA245
AASP256
ATHR266
ALYS317
ATYR335

Catalytic Information from CSA
site_idMCSA1
Number of Residues5
DetailsM-CSA 350
ChainResidueDetails
AALA245activator, electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
AHIS293electrostatic stabiliser, hydrogen bond acceptor
AHIS297electrostatic stabiliser, hydrogen bond acceptor
ATYR305activator, electrostatic stabiliser, hydrogen bond acceptor
ATYR335activator, electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon