Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0001882 | molecular_function | nucleoside binding |
A | 0003676 | molecular_function | nucleic acid binding |
A | 0003677 | molecular_function | DNA binding |
A | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
A | 0006260 | biological_process | DNA replication |
A | 0006261 | biological_process | DNA-templated DNA replication |
A | 0006281 | biological_process | DNA repair |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE DDS A 1 |
Chain | Residue |
A | ARG587 |
A | HOH846 |
B | 2DA112 |
A | GLN613 |
A | HIS639 |
A | ARG659 |
A | LYS663 |
A | PHE667 |
A | TYR671 |
A | MG833 |
A | HOH845 |
site_id | AC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG A 833 |
Chain | Residue |
A | DDS1 |
A | GLU820 |
A | HOH845 |
A | HOH846 |
site_id | AC3 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE ACT A 3 |
Chain | Residue |
A | ARG313 |
A | LEU552 |
site_id | AC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ACT A 5 |
Chain | Residue |
A | LYS542 |
A | SER543 |
A | ASP547 |
C | HOH92 |
site_id | AC5 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL A 834 |
Chain | Residue |
A | THR544 |
A | TYR545 |
A | PRO579 |
A | ASN580 |
A | ASN583 |
C | HOH7 |
C | DC209 |
C | DC210 |
site_id | AC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE GOL A 835 |
Chain | Residue |
A | ARG425 |
A | TRP428 |
A | PHE724 |
site_id | AC7 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE GOL A 836 |
Chain | Residue |
A | HOH53 |
A | HOH69 |
A | HOH100 |
A | HOH126 |
A | LYS354 |
A | ASP355 |
A | ARG563 |
A | PHE564 |
A | ASN565 |
A | GLN566 |
site_id | AC8 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL A 6 |
Chain | Residue |
A | GLU315 |
A | PRO316 |
A | MET317 |
A | GLU445 |
A | HIS561 |
A | THR562 |
A | ARG563 |
A | ASP578 |
site_id | AC9 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE GOL A 7 |
Chain | Residue |
A | VAL737 |
A | SER739 |
A | SER739 |
site_id | BC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE NA A 837 |
Chain | Residue |
A | PRO316 |
A | LYS354 |
A | ASP355 |
A | GLU445 |
A | ARG563 |
site_id | BC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE NA A 838 |
Chain | Residue |
A | LYS314 |
A | ASP578 |
C | DC209 |
site_id | BC3 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE NA A 839 |
Chain | Residue |
A | ASP381 |
A | SER383 |
site_id | BC4 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE NA A 4 |
Chain | Residue |
A | ALA568 |
C | DC207 |
site_id | BC5 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL B 4 |
Chain | Residue |
B | HOH35 |
B | HOH55 |
B | DC106 |
B | DG107 |
B | DG108 |
B | HOH113 |
B | HOH161 |
C | DC209 |
site_id | BC6 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL B 8 |
Chain | Residue |
A | HOH123 |
A | LYS540 |
B | DG107 |
B | DG108 |
B | DC109 |
B | HOH155 |
C | ACT6 |
C | HOH81 |
site_id | BC7 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE ACT C 1 |
Chain | Residue |
A | ARG728 |
C | DG206 |
C | DC207 |
site_id | BC8 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE ACT C 6 |
Chain | Residue |
A | ASN485 |
A | SER486 |
A | ARG487 |
B | GOL8 |
B | HOH60 |
B | HOH119 |
C | HOH128 |
C | DG211 |
C | DT212 |
Functional Information from PROSITE/UniProt
site_id | PS00447 |
Number of Residues | 20 |
Details | DNA_POLYMERASE_A DNA polymerase family A signature. RraAKtinFGvlYgmSahrL |
Chain | Residue | Details |
A | ARG659-LEU678 | |