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3L8E

Crystal Structure of apo form of D,D-heptose 1.7-bisphosphate phosphatase from E. Coli

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0005975biological_processcarbohydrate metabolic process
A0008270molecular_functionzinc ion binding
A0009103biological_processlipopolysaccharide biosynthetic process
A0009244biological_processlipopolysaccharide core region biosynthetic process
A0016787molecular_functionhydrolase activity
A0016791molecular_functionphosphatase activity
A0034200molecular_functionD,D-heptose 1,7-bisphosphate phosphatase activity
A0046872molecular_functionmetal ion binding
A0097171biological_processADP-L-glycero-beta-D-manno-heptose biosynthetic process
B0000287molecular_functionmagnesium ion binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0005975biological_processcarbohydrate metabolic process
B0008270molecular_functionzinc ion binding
B0009103biological_processlipopolysaccharide biosynthetic process
B0009244biological_processlipopolysaccharide core region biosynthetic process
B0016787molecular_functionhydrolase activity
B0016791molecular_functionphosphatase activity
B0034200molecular_functionD,D-heptose 1,7-bisphosphate phosphatase activity
B0046872molecular_functionmetal ion binding
B0097171biological_processADP-L-glycero-beta-D-manno-heptose biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN A 801
ChainResidue
ACYS92
AHIS94
ACYS107
ACYS109
AARG110

site_idAC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE ACY A 901
ChainResidue
AASN54
ALYS111
ALYS137
AHOH202
AASP11
AARG12
AASP13
ATHR53

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN B 802
ChainResidue
BCYS92
BHIS94
BCYS107
BCYS109
BARG110

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE ACY B 902
ChainResidue
BASP11
BARG12
BASP13
BTHR53
BASN54
BLYS111
BLYS137
BHOH193

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Nucleophile => ECO:0000269|PubMed:20050699
ChainResidueDetails
AASP11
BASP11

site_idSWS_FT_FI2
Number of Residues2
DetailsACT_SITE: Proton donor => ECO:0000269|PubMed:20050614, ECO:0000269|PubMed:20050699
ChainResidueDetails
AASP13
BASP13

site_idSWS_FT_FI3
Number of Residues20
DetailsBINDING: BINDING => ECO:0000269|PubMed:20050614
ChainResidueDetails
AASP11
ACYS109
AARG110
AASP136
ALYS137
BASP11
BASP13
BASP19
BCYS92
BHIS94
BCYS107
BCYS109
BARG110
BASP136
BLYS137
AASP13
AASP19
ACYS92
AHIS94
ACYS107

site_idSWS_FT_FI4
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:20050614, ECO:0000269|PubMed:20050699
ChainResidueDetails
ATHR53
BTHR53

site_idSWS_FT_FI5
Number of Residues2
DetailsSITE: Stabilizes the phosphoryl group => ECO:0000269|PubMed:20050614, ECO:0000269|PubMed:20050699
ChainResidueDetails
ATHR53
BTHR53

site_idSWS_FT_FI6
Number of Residues2
DetailsSITE: Contributes to substrate recognition => ECO:0000269|PubMed:20050614
ChainResidueDetails
AARG110
BARG110

site_idSWS_FT_FI7
Number of Residues2
DetailsSITE: Stabilizes the phosphoryl group => ECO:0000269|PubMed:20050614
ChainResidueDetails
ALYS111
BLYS111

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PDB entries from 2024-05-29

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