3L8E
Crystal Structure of apo form of D,D-heptose 1.7-bisphosphate phosphatase from E. Coli
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000287 | molecular_function | magnesium ion binding |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005829 | cellular_component | cytosol |
| A | 0005975 | biological_process | carbohydrate metabolic process |
| A | 0008270 | molecular_function | zinc ion binding |
| A | 0009103 | biological_process | lipopolysaccharide biosynthetic process |
| A | 0009244 | biological_process | lipopolysaccharide core region biosynthetic process |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0016791 | molecular_function | phosphatase activity |
| A | 0034200 | molecular_function | D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase activity |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0097171 | biological_process | ADP-L-glycero-beta-D-manno-heptose biosynthetic process |
| B | 0000287 | molecular_function | magnesium ion binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005829 | cellular_component | cytosol |
| B | 0005975 | biological_process | carbohydrate metabolic process |
| B | 0008270 | molecular_function | zinc ion binding |
| B | 0009103 | biological_process | lipopolysaccharide biosynthetic process |
| B | 0009244 | biological_process | lipopolysaccharide core region biosynthetic process |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0016791 | molecular_function | phosphatase activity |
| B | 0034200 | molecular_function | D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase activity |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0097171 | biological_process | ADP-L-glycero-beta-D-manno-heptose biosynthetic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE ZN A 801 |
| Chain | Residue |
| A | CYS92 |
| A | HIS94 |
| A | CYS107 |
| A | CYS109 |
| A | ARG110 |
| site_id | AC2 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE ACY A 901 |
| Chain | Residue |
| A | ASN54 |
| A | LYS111 |
| A | LYS137 |
| A | HOH202 |
| A | ASP11 |
| A | ARG12 |
| A | ASP13 |
| A | THR53 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE ZN B 802 |
| Chain | Residue |
| B | CYS92 |
| B | HIS94 |
| B | CYS107 |
| B | CYS109 |
| B | ARG110 |
| site_id | AC4 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE ACY B 902 |
| Chain | Residue |
| B | ASP11 |
| B | ARG12 |
| B | ASP13 |
| B | THR53 |
| B | ASN54 |
| B | LYS111 |
| B | LYS137 |
| B | HOH193 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 2 |
| Details | Active site: {"description":"Nucleophile","evidences":[{"source":"PubMed","id":"20050699","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 2 |
| Details | Active site: {"description":"Proton donor","evidences":[{"source":"PubMed","id":"20050614","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"20050699","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 10 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"20050614","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"20050699","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 24 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"20050614","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 2 |
| Details | Site: {"description":"Stabilizes the phosphoryl group","evidences":[{"source":"PubMed","id":"20050614","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"20050699","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 2 |
| Details | Site: {"description":"Contributes to substrate recognition","evidences":[{"source":"PubMed","id":"20050614","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 2 |
| Details | Site: {"description":"Stabilizes the phosphoryl group","evidences":[{"source":"PubMed","id":"20050614","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
