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3L5K

The crystal structure of human Haloacid Dehalogenase-like Hydrolase Domain containing 1A (HDHD1A)

Functional Information from GO Data
ChainGOidnamespacecontents
A0005515molecular_functionprotein binding
A0005829cellular_componentcytosol
A0009117biological_processnucleotide metabolic process
A0016787molecular_functionhydrolase activity
A0016791molecular_functionphosphatase activity
A0046872molecular_functionmetal ion binding
A1990738molecular_functionpseudouridine 5'-phosphatase activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE K A 229
ChainResidue
AASP14
AASP16
AGLU175
AASP176
AHOH298

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 230
ChainResidue
AHOH307
ASER132
APHE134
ASER135
AASP202

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 231
ChainResidue
ATYR41
ATRP43
ALYS46

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 232
ChainResidue
AARG116
ASER119
AHOH250

site_idAC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL A 233
ChainResidue
AGLY148

site_idAC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL A 234
ChainResidue
AALA54

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"description":"Nucleophile","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsActive site: {"description":"Proton donor","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

245663

PDB entries from 2025-12-03

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