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3KZ9

Crystal structure of the master transcriptional regulator, SmcR, in Vibrio vulnificus provides insight into its DNA recognition mechanism

Functional Information from GO Data
ChainGOidnamespacecontents
A0000976molecular_functiontranscription cis-regulatory region binding
A0003677molecular_functionDNA binding
A0003700molecular_functionDNA-binding transcription factor activity
A0006351biological_processDNA-templated transcription
A0006355biological_processregulation of DNA-templated transcription
B0000976molecular_functiontranscription cis-regulatory region binding
B0003677molecular_functionDNA binding
B0003700molecular_functionDNA-binding transcription factor activity
B0006351biological_processDNA-templated transcription
B0006355biological_processregulation of DNA-templated transcription
C0000976molecular_functiontranscription cis-regulatory region binding
C0003677molecular_functionDNA binding
C0003700molecular_functionDNA-binding transcription factor activity
C0006351biological_processDNA-templated transcription
C0006355biological_processregulation of DNA-templated transcription
D0000976molecular_functiontranscription cis-regulatory region binding
D0003677molecular_functionDNA binding
D0003700molecular_functionDNA-binding transcription factor activity
D0006351biological_processDNA-templated transcription
D0006355biological_processregulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 C 206
ChainResidue
CTHR10
CARG11
CLYS146
CARG150
CHOH297

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 206
ChainResidue
AARG11
AARG150
AHOH350

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 D 206
ChainResidue
DHIS70
DARG73
DGLN74
DHOH254
BARG73

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 C 207
ChainResidue
CARG11
CLEU85
CALA89
CASN92
CMSE143
CALA147
CARG150
CGLU152

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 206
ChainResidue
BTHR180
BASN181
CARG9
CLEU139
CASN142
CHOH279

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 D 207
ChainResidue
CARG36
DARG32
DARG36

247536

PDB entries from 2026-01-14

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