Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3KOQ

Crystal structure of a nitroreductase family protein (cd3355) from clostridium difficile 630 at 1.58 A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0009401biological_processphosphoenolpyruvate-dependent sugar phosphotransferase system
A0016020cellular_componentmembrane
A0016491molecular_functionoxidoreductase activity
B0000166molecular_functionnucleotide binding
B0009401biological_processphosphoenolpyruvate-dependent sugar phosphotransferase system
B0016020cellular_componentmembrane
B0016491molecular_functionoxidoreductase activity
C0000166molecular_functionnucleotide binding
C0009401biological_processphosphoenolpyruvate-dependent sugar phosphotransferase system
C0016020cellular_componentmembrane
C0016491molecular_functionoxidoreductase activity
D0000166molecular_functionnucleotide binding
D0009401biological_processphosphoenolpyruvate-dependent sugar phosphotransferase system
D0016020cellular_componentmembrane
D0016491molecular_functionoxidoreductase activity
Functional Information from PDB Data
site_idAC1
Number of Residues26
DetailsBINDING SITE FOR RESIDUE FMN A 300
ChainResidue
AARG10
ATYR119
AARG155
AARG160
AHOH242
AHOH330
AHOH490
AHOH636
BPRO37
BTHR38
BGLY39
ATYR11
BASN41
BILE94
BASP95
BILE98
BCL173
CLYS148
CHOH284
ASER12
AARG14
ATYR66
AVAL115
ATRP116
AVAL117
ACYS118

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 173
ChainResidue
ALYS9
APRO150
AHOH653
AHOH680
AHOH708

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 174
ChainResidue
AGLY40
ATRP82
AHOH881
BGOL176
BFMN300

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL A 175
ChainResidue
AILE149
APRO150
AGLU151

site_idAC5
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 176
ChainResidue
AMSE1
AASN2
APHE3
AGLU109
BMSE1
BPHE3
BLEU6
BGLU109

site_idAC6
Number of Residues24
DetailsBINDING SITE FOR RESIDUE FMN B 300
ChainResidue
APRO37
ATHR38
AGLY39
AASN41
AILE94
AASP95
AILE98
AGOL174
BARG10
BTYR11
BSER12
BARG14
BTYR66
BVAL115
BTRP116
BVAL117
BCYS118
BTYR119
BARG155
BARG160
BGOL176
BHOH197
BHOH233
BHOH247

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 173
ChainResidue
AFMN300
BGLY40
CILE149

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL B 174
ChainResidue
BILE149
BHOH779
CGLY40
DFMN300

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 175
ChainResidue
APHE86
BALA62
BASN64
BTYR119
BHOH195
BHOH229

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 176
ChainResidue
AGOL174
AHOH881
BARG14
BFMN300
BHOH716
BHOH789

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 177
ChainResidue
ATYR119
AHOH434
AHOH577
BARG84
BPRO85
BPHE86

site_idBC3
Number of Residues22
DetailsBINDING SITE FOR RESIDUE FMN C 300
ChainResidue
CARG14
CTYR66
CVAL115
CTRP116
CVAL117
CCYS118
CTYR119
CARG155
CARG160
CHOH264
CHOH336
CHOH709
DPRO37
DTHR38
DGLY39
DASN41
DILE94
DILE98
DGOL175
CARG10
CTYR11
CSER12

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL C 173
ChainResidue
CALA62
CASN64
CTYR119
CHOH311
CHOH769
DPHE86

site_idBC5
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL C 174
ChainResidue
CLYS9
CTHR108
CGLY111
CLEU112
CALA113
CGLU146
CPRO150
CHOH237
CHOH371
CHOH414

site_idBC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL C 175
ChainResidue
CLYS158
CTHR159
CARG160
CVAL161
DASN41
DGLN43

site_idBC7
Number of Residues26
DetailsBINDING SITE FOR RESIDUE FMN D 300
ChainResidue
BLYS148
BCL174
CPRO37
CTHR38
CGLY39
CASN41
CLEU91
CILE94
CILE98
DARG10
DTYR11
DSER12
DARG14
DTYR66
DVAL115
DTRP116
DVAL117
DCYS118
DTYR119
DARG155
DARG160
DHOH241
DHOH280
DHOH356
DHOH365
DHOH654

site_idBC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL D 173
ChainResidue
DLYS9
DPRO150
DHOH341
DHOH580
DHOH762

site_idBC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL D 174
ChainResidue
CMSE1
CGLU109
DMSE1
DASN2
DGLU109

site_idCC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL D 175
ChainResidue
CTYR119
CFMN300
DGLY40
DTRP82

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon