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3KAL

Structure of homoglutathione synthetase from Glycine max in closed conformation with homoglutathione, ADP, a sulfate ion, and three magnesium ions bound

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0000287molecular_functionmagnesium ion binding
A0004363molecular_functionglutathione synthase activity
A0005524molecular_functionATP binding
A0005829cellular_componentcytosol
A0006750biological_processglutathione biosynthetic process
A0016874molecular_functionligase activity
A0043295molecular_functionglutathione binding
A0046872molecular_functionmetal ion binding
B0000166molecular_functionnucleotide binding
B0000287molecular_functionmagnesium ion binding
B0004363molecular_functionglutathione synthase activity
B0005524molecular_functionATP binding
B0005829cellular_componentcytosol
B0006750biological_processglutathione biosynthetic process
B0016874molecular_functionligase activity
B0043295molecular_functionglutathione binding
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues25
DetailsBINDING SITE FOR RESIDUE ADP A 500
ChainResidue
AILE168
ATYR399
AMET424
AGLN425
AARG426
AILE427
AGLU450
ALYS477
AMG502
AMG503
ASO4505
AGLU169
AHOH588
AHOH650
AHOH683
AHOH710
AHOH734
AHOH864
ALYS334
AVAL386
ALYS388
AGLU392
AGLY393
AGLY394
AASN397

site_idAC2
Number of Residues18
DetailsBINDING SITE FOR RESIDUE HGS A 501
ChainResidue
AARG153
AASN171
AILE173
ASER174
ATHR175
ASER176
APHE177
AGLN238
AGLU241
AASN243
AARG295
ATYR298
AARG475
AVAL486
ALEU487
ASO4505
AHOH688
AHOH835

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 502
ChainResidue
AGLU169
AASN171
AGLU392
AADP500
ASO4505

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 503
ChainResidue
AGLU169
AADP500
ASO4505
AHOH588
AHOH710

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 504
ChainResidue
AGLU169
AMET170
AGLY332
AGLU392
AHOH566
AHOH634

site_idAC6
Number of Residues13
DetailsBINDING SITE FOR RESIDUE SO4 A 505
ChainResidue
AARG153
AASP155
AGLU169
AASN171
AGLU392
AGLY393
AARG475
AADP500
AHGS501
AMG502
AMG503
AHOH588
AHOH710

site_idAC7
Number of Residues15
DetailsBINDING SITE FOR RESIDUE HGS A 506
ChainResidue
ATRP49
AASN53
ACYS182
ALEU183
AGLY186
AASN209
AASN210
AVAL212
AASP213
AHOH658
AHOH675
AHOH747
AHOH828
AHOH854
AHOH861

site_idAC8
Number of Residues26
DetailsBINDING SITE FOR RESIDUE ADP B 500
ChainResidue
BMET424
BGLN425
BARG426
BILE427
BGLU450
BLYS477
BMG502
BMG503
BSO4505
BHOH627
BHOH663
BHOH684
BHOH758
BHOH800
BILE168
BGLU169
BLYS334
BVAL386
BLYS388
BARG391
BGLU392
BGLY393
BGLY394
BASN396
BASN397
BTYR399

site_idAC9
Number of Residues19
DetailsBINDING SITE FOR RESIDUE HGS B 501
ChainResidue
BARG153
BASN171
BILE173
BSER174
BTHR175
BSER176
BGLN238
BGLU241
BASN243
BARG295
BTYR298
BARG475
BGLY485
BVAL486
BSO4505
BHOH545
BHOH551
BHOH688
BHOH807

site_idBC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG B 502
ChainResidue
BGLU169
BASN171
BGLU392
BADP500
BSO4505

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG B 503
ChainResidue
BGLU169
BADP500
BSO4505
BHOH627
BHOH663

site_idBC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG B 504
ChainResidue
BGLU169
BMET170
BGLY332
BGLU392
BHOH537

site_idBC4
Number of Residues13
DetailsBINDING SITE FOR RESIDUE SO4 B 505
ChainResidue
BARG153
BASP155
BGLU169
BASN171
BGLU392
BGLY393
BARG475
BADP500
BHGS501
BMG502
BMG503
BHOH627
BHOH663

site_idBC5
Number of Residues8
DetailsBINDING SITE FOR RESIDUE HGS B 506
ChainResidue
BASN53
BCYS182
BLEU183
BASP213
BHOH536
BHOH655
BHOH828
BHOH834

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PDB entries from 2024-04-17

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