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3K5W

Crystal structure of a Carbohydrate kinase (YjeF family)from Helicobacter pylori

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0003824molecular_functioncatalytic activity
A0005524molecular_functionATP binding
A0016829molecular_functionlyase activity
A0016836molecular_functionhydro-lyase activity
A0016853molecular_functionisomerase activity
A0046496biological_processnicotinamide nucleotide metabolic process
A0046872molecular_functionmetal ion binding
A0052855molecular_functionADP-dependent NAD(P)H-hydrate dehydratase activity
A0052856molecular_functionNAD(P)HX epimerase activity
A0110051biological_processmetabolite repair
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 A 501
ChainResidue
AASP56
AASN57
AILE123
AGLY124
AHIS126
AHOH548

Functional Information from PROSITE/UniProt
site_idPS01050
Number of Residues11
DetailsYJEF_C_2 YjeF C-terminal domain signature 2. AGsGDVLAGlI
ChainResidueDetails
AALA410-ILE420

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues10
DetailsRegion: {"description":"NADPHX 1; for epimerase activity","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues6
DetailsRegion: {"description":"NADPHX 2; for dehydratase activity","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues19
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

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PDB entries from 2025-11-05

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