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3K52

Crystal Structure of Isopentenyl Phosphate Kinase from M. jannaschii in complex with IP

Functional Information from GO Data
ChainGOidnamespacecontents
A0005524molecular_functionATP binding
A0005829cellular_componentcytosol
A0008299biological_processisoprenoid biosynthetic process
A0016114biological_processterpenoid biosynthetic process
A0016301molecular_functionkinase activity
A0016310biological_processphosphorylation
A0102043molecular_functionisopentenyl phosphate kinase activity
B0005524molecular_functionATP binding
B0005829cellular_componentcytosol
B0008299biological_processisoprenoid biosynthetic process
B0016114biological_processterpenoid biosynthetic process
B0016301molecular_functionkinase activity
B0016310biological_processphosphorylation
B0102043molecular_functionisopentenyl phosphate kinase activity
Functional Information from PDB Data
site_idAC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE IP8 A 300
ChainResidue
AGLY54
AGLY55
AGLY59
AHIS60
AILE86
AMET90
AILE156
ASER158
AGLY159

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 303
ChainResidue
AILE21
ALYS22
ATRP23
AASP24
AARG88
AHOH262

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 304
ChainResidue
ALYS6
AGLY8
AGLY9
ALYS221
AHOH275

site_idAC4
Number of Residues10
DetailsBINDING SITE FOR RESIDUE IP8 B 300
ChainResidue
BHIS53
BGLY54
BGLY55
BGLY59
BHIS60
BGLY144
BASP145
BILE156
BSER158
BGLY159

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 301
ChainResidue
BLYS6
BGLY8
BGLY9
BTHR179
BLYS221
BHOH267

site_idAC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 B 302
ChainResidue
AASN241
BILE21
BLYS22
BTRP23
BASP24
BASN25
BHOH268

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000305
ChainResidueDetails
ALYS6
ALYS221
BLYS6
BLYS221

site_idSWS_FT_FI2
Number of Residues6
DetailsBINDING:
ChainResidueDetails
AGLY55
AHIS60
AGLY159
BGLY55
BHIS60
BGLY159

site_idSWS_FT_FI3
Number of Residues6
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AGLY56
AASP180
AGLY217
BGLY56
BASP180
BGLY217

site_idSWS_FT_FI4
Number of Residues2
DetailsSITE: Transition state stabilizer => ECO:0000250
ChainResidueDetails
ALYS15
BLYS15

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PDB entries from 2024-10-16

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