3JBB
Characterization of red-shifted phycobiliprotein complexes isolated from the chlorophyll f-containing cyanobacterium Halomicronema hongdechloris
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0009579 | cellular_component | thylakoid |
| A | 0015979 | biological_process | photosynthesis |
| A | 0016020 | cellular_component | membrane |
| A | 0030076 | cellular_component | light-harvesting complex |
| A | 0030089 | cellular_component | phycobilisome |
| A | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| B | 0009579 | cellular_component | thylakoid |
| B | 0015979 | biological_process | photosynthesis |
| B | 0016020 | cellular_component | membrane |
| B | 0030076 | cellular_component | light-harvesting complex |
| B | 0030089 | cellular_component | phycobilisome |
| B | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| C | 0009579 | cellular_component | thylakoid |
| C | 0015979 | biological_process | photosynthesis |
| C | 0016020 | cellular_component | membrane |
| C | 0030076 | cellular_component | light-harvesting complex |
| C | 0030089 | cellular_component | phycobilisome |
| C | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| D | 0009579 | cellular_component | thylakoid |
| D | 0015979 | biological_process | photosynthesis |
| D | 0016020 | cellular_component | membrane |
| D | 0030076 | cellular_component | light-harvesting complex |
| D | 0030089 | cellular_component | phycobilisome |
| D | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| E | 0009579 | cellular_component | thylakoid |
| E | 0015979 | biological_process | photosynthesis |
| E | 0016020 | cellular_component | membrane |
| E | 0030076 | cellular_component | light-harvesting complex |
| E | 0030089 | cellular_component | phycobilisome |
| E | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| F | 0009579 | cellular_component | thylakoid |
| F | 0015979 | biological_process | photosynthesis |
| F | 0016020 | cellular_component | membrane |
| F | 0030076 | cellular_component | light-harvesting complex |
| F | 0030089 | cellular_component | phycobilisome |
| F | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| G | 0009579 | cellular_component | thylakoid |
| G | 0015979 | biological_process | photosynthesis |
| G | 0016020 | cellular_component | membrane |
| G | 0030076 | cellular_component | light-harvesting complex |
| G | 0030089 | cellular_component | phycobilisome |
| G | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| H | 0009579 | cellular_component | thylakoid |
| H | 0015979 | biological_process | photosynthesis |
| H | 0016020 | cellular_component | membrane |
| H | 0030076 | cellular_component | light-harvesting complex |
| H | 0030089 | cellular_component | phycobilisome |
| H | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| I | 0009579 | cellular_component | thylakoid |
| I | 0015979 | biological_process | photosynthesis |
| I | 0016020 | cellular_component | membrane |
| I | 0030076 | cellular_component | light-harvesting complex |
| I | 0030089 | cellular_component | phycobilisome |
| I | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| J | 0009579 | cellular_component | thylakoid |
| J | 0015979 | biological_process | photosynthesis |
| J | 0016020 | cellular_component | membrane |
| J | 0030076 | cellular_component | light-harvesting complex |
| J | 0030089 | cellular_component | phycobilisome |
| J | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| K | 0009579 | cellular_component | thylakoid |
| K | 0015979 | biological_process | photosynthesis |
| K | 0016020 | cellular_component | membrane |
| K | 0030076 | cellular_component | light-harvesting complex |
| K | 0030089 | cellular_component | phycobilisome |
| K | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| L | 0009579 | cellular_component | thylakoid |
| L | 0015979 | biological_process | photosynthesis |
| L | 0016020 | cellular_component | membrane |
| L | 0030076 | cellular_component | light-harvesting complex |
| L | 0030089 | cellular_component | phycobilisome |
| L | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 22 |
| Details | BINDING SITE FOR RESIDUE CYC A 201 |
| Chain | Residue |
| A | TYR65 |
| A | THR107 |
| A | MET115 |
| A | TYR116 |
| A | LEU119 |
| A | VAL121 |
| A | HOH329 |
| A | HOH352 |
| A | HOH382 |
| F | TYR62 |
| F | THR66 |
| A | ASN71 |
| F | TYR73 |
| F | THR74 |
| F | HOH331 |
| A | GLN77 |
| A | GLN80 |
| A | CYS81 |
| A | ARG83 |
| A | ASP84 |
| A | TRP87 |
| A | TYR88 |
| site_id | AC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 A 202 |
| Chain | Residue |
| A | GLN35 |
| A | ARG38 |
| A | HOH399 |
| site_id | AC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 A 203 |
| Chain | Residue |
| A | SER142 |
| A | ALA143 |
| A | HOH397 |
| site_id | AC4 |
| Number of Residues | 19 |
| Details | BINDING SITE FOR RESIDUE CYC B 201 |
| Chain | Residue |
| B | VAL65 |
| B | MEN71 |
| B | MET72 |
| B | ARG76 |
| B | ARG77 |
| B | CYS81 |
| B | ARG83 |
| B | ASP84 |
| B | TYR87 |
| B | TYR91 |
| B | ARG107 |
| B | TYR116 |
| B | LEU119 |
| B | PRO122 |
| B | THR126 |
| B | HOH323 |
| B | HOH324 |
| B | HOH441 |
| B | HOH460 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 B 202 |
| Chain | Residue |
| B | ASP20 |
| B | GLY21 |
| B | HOH357 |
| B | HOH468 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 B 203 |
| Chain | Residue |
| B | ILE123 |
| B | SER124 |
| B | HOH413 |
| B | HOH486 |
| B | HOH487 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 B 204 |
| Chain | Residue |
| A | HOH447 |
| B | GLU35 |
| B | ARG39 |
| B | HOH485 |
| site_id | AC8 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 B 205 |
| Chain | Residue |
| B | THR50 |
| B | LYS53 |
| B | HOH496 |
| B | HOH503 |
| C | ASN120 |
| site_id | AC9 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE SO4 B 206 |
| Chain | Residue |
| B | ARG77 |
| B | HOH390 |
| site_id | BC1 |
| Number of Residues | 22 |
| Details | BINDING SITE FOR RESIDUE CYC C 201 |
| Chain | Residue |
| B | TYR62 |
| B | THR66 |
| B | TYR73 |
| B | THR74 |
| B | HOH368 |
| C | TYR65 |
| C | ASN71 |
| C | GLN77 |
| C | GLN80 |
| C | CYS81 |
| C | ARG83 |
| C | ASP84 |
| C | TRP87 |
| C | TYR88 |
| C | THR107 |
| C | MET115 |
| C | TYR116 |
| C | LEU119 |
| C | VAL121 |
| C | HOH314 |
| C | HOH349 |
| C | HOH353 |
| site_id | BC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 C 202 |
| Chain | Residue |
| C | GLN35 |
| C | ARG38 |
| C | HOH328 |
| site_id | BC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 C 203 |
| Chain | Residue |
| C | SER142 |
| C | ALA143 |
| C | HOH404 |
| site_id | BC4 |
| Number of Residues | 18 |
| Details | BINDING SITE FOR RESIDUE CYC D 201 |
| Chain | Residue |
| D | ARG77 |
| D | CYS81 |
| D | ARG83 |
| D | ASP84 |
| D | TYR87 |
| D | TYR91 |
| D | ARG107 |
| D | TYR116 |
| D | LEU119 |
| D | PRO122 |
| D | HOH367 |
| D | HOH381 |
| D | HOH438 |
| D | HOH443 |
| D | VAL65 |
| D | MEN71 |
| D | MET72 |
| D | ARG76 |
| site_id | BC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 D 202 |
| Chain | Residue |
| D | ASP20 |
| D | GLY21 |
| D | HOH334 |
| D | HOH478 |
| site_id | BC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 D 203 |
| Chain | Residue |
| D | ILE123 |
| D | SER124 |
| D | HOH464 |
| D | HOH486 |
| site_id | BC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 D 204 |
| Chain | Residue |
| D | GLU35 |
| D | ARG39 |
| D | HOH488 |
| D | HOH500 |
| site_id | BC8 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 D 205 |
| Chain | Residue |
| D | THR50 |
| D | LYS53 |
| D | HOH492 |
| D | HOH504 |
| E | ASN120 |
| site_id | BC9 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE SO4 D 206 |
| Chain | Residue |
| D | ARG77 |
| D | HOH385 |
| site_id | CC1 |
| Number of Residues | 22 |
| Details | BINDING SITE FOR RESIDUE CYC E 201 |
| Chain | Residue |
| D | TYR62 |
| D | THR66 |
| D | TYR73 |
| D | THR74 |
| D | HOH370 |
| E | TYR65 |
| E | ASN71 |
| E | GLN77 |
| E | GLN80 |
| E | CYS81 |
| E | ARG83 |
| E | ASP84 |
| E | TRP87 |
| E | TYR88 |
| E | THR107 |
| E | MET115 |
| E | TYR116 |
| E | LEU119 |
| E | VAL121 |
| E | HOH346 |
| E | HOH389 |
| E | HOH434 |
| site_id | CC2 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE SO4 E 202 |
| Chain | Residue |
| E | GLN35 |
| E | ARG38 |
| site_id | CC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 E 203 |
| Chain | Residue |
| E | SER142 |
| E | ALA143 |
| E | HOH402 |
| site_id | CC4 |
| Number of Residues | 17 |
| Details | BINDING SITE FOR RESIDUE CYC F 201 |
| Chain | Residue |
| F | VAL65 |
| F | MEN71 |
| F | MET72 |
| F | ARG76 |
| F | ARG77 |
| F | CYS81 |
| F | ARG83 |
| F | ASP84 |
| F | TYR87 |
| F | TYR91 |
| F | TYR116 |
| F | LEU119 |
| F | PRO122 |
| F | HOH358 |
| F | HOH401 |
| F | HOH464 |
| F | HOH497 |
| site_id | CC5 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 F 202 |
| Chain | Residue |
| F | ASP20 |
| F | GLY21 |
| F | HOH472 |
| site_id | CC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 F 203 |
| Chain | Residue |
| F | ILE123 |
| F | SER124 |
| F | HOH466 |
| site_id | CC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 F 204 |
| Chain | Residue |
| E | HOH442 |
| F | GLU35 |
| F | ARG39 |
| F | HOH355 |
| site_id | CC8 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 F 205 |
| Chain | Residue |
| A | ASN120 |
| F | THR50 |
| F | LYS53 |
| F | HOH434 |
| F | HOH494 |
| site_id | CC9 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 F 206 |
| Chain | Residue |
| F | ARG77 |
| F | HOH404 |
| F | HOH493 |
| F | HOH508 |
| site_id | DC1 |
| Number of Residues | 22 |
| Details | BINDING SITE FOR RESIDUE CYC G 201 |
| Chain | Residue |
| G | TYR65 |
| G | ASN71 |
| G | GLN77 |
| G | GLN80 |
| G | CYS81 |
| G | ARG83 |
| G | ASP84 |
| G | TRP87 |
| G | TYR88 |
| G | THR107 |
| G | MET115 |
| G | TYR116 |
| G | LEU119 |
| G | VAL121 |
| G | HOH329 |
| G | HOH352 |
| G | HOH382 |
| L | TYR62 |
| L | THR66 |
| L | TYR73 |
| L | THR74 |
| L | HOH331 |
| site_id | DC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 G 202 |
| Chain | Residue |
| G | GLN35 |
| G | ARG38 |
| G | HOH399 |
| site_id | DC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 G 203 |
| Chain | Residue |
| G | SER142 |
| G | ALA143 |
| G | HOH397 |
| site_id | DC4 |
| Number of Residues | 19 |
| Details | BINDING SITE FOR RESIDUE CYC H 201 |
| Chain | Residue |
| H | VAL65 |
| H | MEN71 |
| H | MET72 |
| H | ARG76 |
| H | ARG77 |
| H | CYS81 |
| H | ARG83 |
| H | ASP84 |
| H | TYR87 |
| H | TYR91 |
| H | ARG107 |
| H | TYR116 |
| H | LEU119 |
| H | PRO122 |
| H | THR126 |
| H | HOH322 |
| H | HOH323 |
| H | HOH440 |
| H | HOH459 |
| site_id | DC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 H 202 |
| Chain | Residue |
| H | ASP20 |
| H | GLY21 |
| H | HOH356 |
| H | HOH467 |
| site_id | DC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 H 203 |
| Chain | Residue |
| H | ILE123 |
| H | SER124 |
| H | HOH412 |
| H | HOH485 |
| H | HOH486 |
| site_id | DC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 H 204 |
| Chain | Residue |
| G | HOH447 |
| H | GLU35 |
| H | ARG39 |
| H | HOH484 |
| site_id | DC8 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 H 205 |
| Chain | Residue |
| H | THR50 |
| H | LYS53 |
| H | HOH495 |
| H | HOH502 |
| I | ASN120 |
| site_id | DC9 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE SO4 H 206 |
| Chain | Residue |
| H | ARG77 |
| H | HOH389 |
| site_id | EC1 |
| Number of Residues | 22 |
| Details | BINDING SITE FOR RESIDUE CYC I 201 |
| Chain | Residue |
| H | TYR62 |
| H | THR66 |
| H | TYR73 |
| H | THR74 |
| H | HOH367 |
| I | TYR65 |
| I | ASN71 |
| I | GLN77 |
| I | GLN80 |
| I | CYS81 |
| I | ARG83 |
| I | ASP84 |
| I | TRP87 |
| I | TYR88 |
| I | THR107 |
| I | MET115 |
| I | TYR116 |
| I | LEU119 |
| I | VAL121 |
| I | HOH314 |
| I | HOH349 |
| I | HOH353 |
| site_id | EC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 I 202 |
| Chain | Residue |
| I | GLN35 |
| I | ARG38 |
| I | HOH328 |
| site_id | EC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 I 203 |
| Chain | Residue |
| I | SER142 |
| I | ALA143 |
| I | HOH404 |
| site_id | EC4 |
| Number of Residues | 18 |
| Details | BINDING SITE FOR RESIDUE CYC J 201 |
| Chain | Residue |
| J | VAL65 |
| J | MEN71 |
| J | MET72 |
| J | ARG76 |
| J | ARG77 |
| J | CYS81 |
| J | ARG83 |
| J | ASP84 |
| J | TYR87 |
| J | TYR91 |
| J | ARG107 |
| J | TYR116 |
| J | LEU119 |
| J | PRO122 |
| J | HOH367 |
| J | HOH381 |
| J | HOH438 |
| J | HOH443 |
| site_id | EC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 J 202 |
| Chain | Residue |
| J | ASP20 |
| J | GLY21 |
| J | HOH334 |
| J | HOH478 |
| site_id | EC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 J 203 |
| Chain | Residue |
| J | ILE123 |
| J | SER124 |
| J | HOH464 |
| J | HOH486 |
| site_id | EC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 J 204 |
| Chain | Residue |
| J | GLU35 |
| J | ARG39 |
| J | HOH488 |
| J | HOH500 |
| site_id | EC8 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 J 205 |
| Chain | Residue |
| J | THR50 |
| J | LYS53 |
| J | HOH492 |
| J | HOH504 |
| K | ASN120 |
| site_id | EC9 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE SO4 J 206 |
| Chain | Residue |
| J | ARG77 |
| J | HOH385 |
| site_id | FC1 |
| Number of Residues | 22 |
| Details | BINDING SITE FOR RESIDUE CYC K 201 |
| Chain | Residue |
| J | TYR62 |
| J | THR66 |
| J | TYR73 |
| J | THR74 |
| J | HOH370 |
| K | TYR65 |
| K | ASN71 |
| K | GLN77 |
| K | GLN80 |
| K | CYS81 |
| K | ARG83 |
| K | ASP84 |
| K | TRP87 |
| K | TYR88 |
| K | THR107 |
| K | MET115 |
| K | TYR116 |
| K | LEU119 |
| K | VAL121 |
| K | HOH346 |
| K | HOH389 |
| K | HOH434 |
| site_id | FC2 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE SO4 K 202 |
| Chain | Residue |
| K | GLN35 |
| K | ARG38 |
| site_id | FC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 K 203 |
| Chain | Residue |
| K | SER142 |
| K | ALA143 |
| K | HOH402 |
| site_id | FC4 |
| Number of Residues | 17 |
| Details | BINDING SITE FOR RESIDUE CYC L 201 |
| Chain | Residue |
| L | VAL65 |
| L | MEN71 |
| L | MET72 |
| L | ARG76 |
| L | ARG77 |
| L | CYS81 |
| L | ARG83 |
| L | ASP84 |
| L | TYR87 |
| L | TYR91 |
| L | TYR116 |
| L | LEU119 |
| L | PRO122 |
| L | HOH358 |
| L | HOH401 |
| L | HOH464 |
| L | HOH497 |
| site_id | FC5 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 L 202 |
| Chain | Residue |
| L | ASP20 |
| L | GLY21 |
| L | HOH472 |
| site_id | FC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 L 203 |
| Chain | Residue |
| L | ILE123 |
| L | SER124 |
| L | HOH466 |
| site_id | FC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 L 204 |
| Chain | Residue |
| K | HOH442 |
| L | GLU35 |
| L | ARG39 |
| L | HOH355 |
| site_id | FC8 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 L 205 |
| Chain | Residue |
| G | ASN120 |
| L | THR50 |
| L | LYS53 |
| L | HOH434 |
| L | HOH494 |
| site_id | FC9 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 L 206 |
| Chain | Residue |
| L | ARG77 |
| L | HOH404 |
| L | HOH493 |
| L | HOH508 |
