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3J5Y

Structure of the mammalian ribosomal pre-termination complex associated with eRF1-eRF3-GDPNP

Replaces:  3J2K
Functional Information from GO Data
ChainGOidnamespacecontents
A0000184biological_processnuclear-transcribed mRNA catabolic process, nonsense-mediated decay
A0002184biological_processcytoplasmic translational termination
A0003723molecular_functionRNA binding
A0003747molecular_functiontranslation release factor activity
A0004045molecular_functionaminoacyl-tRNA hydrolase activity
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006412biological_processtranslation
A0006415biological_processtranslational termination
A0006449biological_processregulation of translational termination
A0006479biological_processprotein methylation
A0008079molecular_functiontranslation termination factor activity
A0016149molecular_functiontranslation release factor activity, codon specific
A0018444cellular_componenttranslation release factor complex
A0022626cellular_componentcytosolic ribosome
A0043022molecular_functionribosome binding
A1990825molecular_functionsequence-specific mRNA binding
B0003924molecular_functionGTPase activity
B0005525molecular_functionGTP binding
Functional Information from PROSITE/UniProt
site_idPS00301
Number of Residues16
DetailsG_TR_1 Translational (tr)-type guanine nucleotide-binding (G) domain signature. DTnqeERdKGKTVevG
ChainResidueDetails
BASP266-GLY281

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:O74718
ChainResidueDetails
BASP222
BASN358
BSER400

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: N5-methylglutamine => ECO:0000269|PubMed:18539146, ECO:0000269|PubMed:20606008, ECO:0000269|PubMed:26797129
ChainResidueDetails
AGLN185

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Phosphothreonine => ECO:0007744|PubMed:23186163
ChainResidueDetails
ATHR347

site_idSWS_FT_FI4
Number of Residues3
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
ALYS87
ALYS404

site_idSWS_FT_FI5
Number of Residues1
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:37651229
ChainResidueDetails
ALYS279

222036

PDB entries from 2024-07-03

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