3J0C
Models of E1, E2 and CP of Venezuelan Equine Encephalitis Virus TC-83 strain restrained by a near atomic resolution cryo-EM map
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004252 | molecular_function | serine-type endopeptidase activity |
| A | 0019028 | cellular_component | viral capsid |
| A | 0055036 | cellular_component | virion membrane |
| B | 0005198 | molecular_function | structural molecule activity |
| B | 0019028 | cellular_component | viral capsid |
| C | 0004252 | molecular_function | serine-type endopeptidase activity |
| C | 0006508 | biological_process | proteolysis |
| D | 0004252 | molecular_function | serine-type endopeptidase activity |
| D | 0019028 | cellular_component | viral capsid |
| D | 0055036 | cellular_component | virion membrane |
| E | 0005198 | molecular_function | structural molecule activity |
| E | 0019028 | cellular_component | viral capsid |
| F | 0004252 | molecular_function | serine-type endopeptidase activity |
| F | 0006508 | biological_process | proteolysis |
| G | 0004252 | molecular_function | serine-type endopeptidase activity |
| G | 0019028 | cellular_component | viral capsid |
| G | 0055036 | cellular_component | virion membrane |
| H | 0005198 | molecular_function | structural molecule activity |
| H | 0019028 | cellular_component | viral capsid |
| I | 0004252 | molecular_function | serine-type endopeptidase activity |
| I | 0006508 | biological_process | proteolysis |
| J | 0004252 | molecular_function | serine-type endopeptidase activity |
| J | 0019028 | cellular_component | viral capsid |
| J | 0055036 | cellular_component | virion membrane |
| K | 0005198 | molecular_function | structural molecule activity |
| K | 0019028 | cellular_component | viral capsid |
| L | 0004252 | molecular_function | serine-type endopeptidase activity |
| L | 0006508 | biological_process | proteolysis |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 12 |
| Details | ACT_SITE: Charge relay system => ECO:0000255|PROSITE-ProRule:PRU01027 |
| Chain | Residue | Details |
| C | HIS152 | |
| L | HIS152 | |
| L | ASP174 | |
| L | SER226 | |
| C | ASP174 | |
| C | SER226 | |
| F | HIS152 | |
| F | ASP174 | |
| F | SER226 | |
| I | HIS152 | |
| I | ASP174 | |
| I | SER226 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 8 |
| Details | SITE: Involved in dimerization of the capsid protein => ECO:0000250|UniProtKB:Q86925 |
| Chain | Residue | Details |
| C | TYR200 | |
| C | ASN233 | |
| F | TYR200 | |
| F | ASN233 | |
| I | TYR200 | |
| I | ASN233 | |
| L | TYR200 | |
| L | ASN233 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 4 |
| Details | SITE: Cleavage; by autolysis => ECO:0000250|UniProtKB:P03315 |
| Chain | Residue | Details |
| C | TRP275 | |
| F | TRP275 | |
| I | TRP275 | |
| L | TRP275 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 4 |
| Details | MOD_RES: Phosphoserine => ECO:0000250|UniProtKB:P09592 |
| Chain | Residue | Details |
| C | SER124 | |
| K | CYS396 | |
| K | CYS416 | |
| K | CYS417 | |
| F | SER124 | |
| I | SER124 | |
| L | SER124 | |
| E | CYS416 | |
| E | CYS417 | |
| H | CYS396 | |
| H | CYS416 | |
| H | CYS417 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 4 |
| Details | MOD_RES: Phosphothreonine => ECO:0000250|UniProtKB:P09592 |
| Chain | Residue | Details |
| C | THR127 | |
| F | THR127 | |
| I | THR127 | |
| L | THR127 | |
| H | ASN212 | |
| H | ASN318 | |
| K | ASN212 | |
| K | ASN318 |
