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3IQD

Structure of Octopine-dehydrogenase in complex with NADH and Agmatine

Functional Information from GO Data
ChainGOidnamespacecontents
B0000166molecular_functionnucleotide binding
B0016491molecular_functionoxidoreductase activity
B0047830molecular_functionD-octopine dehydrogenase activity
Functional Information from PDB Data
site_idAC1
Number of Residues15
DetailsBINDING SITE FOR RESIDUE NAI B 405
ChainResidue
BGLY10
BLEU144
BTRP146
BALA147
BCYS148
BARG324
BHIS403
BGLY11
BASN12
BGLY13
BPHE35
BGLU38
BPRO91
BPHE93
BPRO116

site_idAC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE AG2 B 406
ChainResidue
BGLU142
BTHR143
BMET206
BSER207
BHIS212
BTRP278
BHIS403
BHIS404

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"evidences":[{"source":"PubMed","id":"18599075","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"18599075","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"20808820","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"18599075","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues2
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"20808820","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

246905

PDB entries from 2025-12-31

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