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3IPP

crystal structure of sulfur-free YnjE

Functional Information from GO Data
ChainGOidnamespacecontents
A0004792molecular_functionthiosulfate-cyanide sulfurtransferase activity
A0016783molecular_functionsulfurtransferase activity
B0004792molecular_functionthiosulfate-cyanide sulfurtransferase activity
B0016783molecular_functionsulfurtransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE PO4 A 1
ChainResidue
ATYR326
ACYS385
AGLY386
ATHR387
AGLY388
ATRP389
AARG390

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 B 2
ChainResidue
BTHR387
BGLY388
BTRP389
BARG390
BTYR326
BCYS385

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE PO4 B 3
ChainResidue
BGLU172
BALA174
BALA177
BLYS179
BLEU180
BTYR181
BTYR191

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE PO4 A 4
ChainResidue
AGLU172
AALA174
AALA177
ALYS179
ALEU180
ATYR181
ATYR191

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PO4 B 5
ChainResidue
BPRO377
BMET401
BGLY402
BTRP403
BHOH676

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL B 1
ChainResidue
BSER315
BTRP316
BTRP340
BGLY344
BASP352

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 436
ChainResidue
ATRP316
ATRP340
AGLY344
AASP352
BASP33
BASP128
BHOH661

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 437
ChainResidue
AGLN90
AHIS342
AASP352
AARG361
AHOH510
BASP33
BGLU132

site_idAC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA A 438
ChainResidue
ATRP203
AASN204
ATHR387
AASP410
AHOH594

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA B 436
ChainResidue
BTRP203
BASN204
BARG238
BTHR387
BASP410
BHOH444

Functional Information from PROSITE/UniProt
site_idPS00380
Number of Residues12
DetailsRHODANESE_1 Rhodanese signature 1. YlisHIPGAdyI
ChainResidueDetails
ATYR181-ILE192

site_idPS00683
Number of Residues11
DetailsRHODANESE_2 Rhodanese C-terminal signature. VsvYDGGWyEW
ChainResidueDetails
AVAL406-TRP416

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues204
DetailsDomain: {"description":"Rhodanese 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00173","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues212
DetailsDomain: {"description":"Rhodanese 2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00173","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues242
DetailsDomain: {"description":"Rhodanese 3","evidences":[{"source":"PROSITE-ProRule","id":"PRU00173","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsActive site: {"description":"Cysteine persulfide intermediate","evidences":[{"source":"PROSITE-ProRule","id":"PRU00173","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"19798741","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues2
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

239492

PDB entries from 2025-07-30

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