3IP1
Structure of putative alcohol dehydrogenase (TM_042) from Thermotoga maritima
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0006020 | biological_process | inositol metabolic process |
| A | 0008270 | molecular_function | zinc ion binding |
| A | 0016491 | molecular_function | oxidoreductase activity |
| A | 0046183 | biological_process | L-idonate catabolic process |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0050572 | molecular_function | L-idonate 5-dehydrogenase [NAD(P)+] activity |
| B | 0006020 | biological_process | inositol metabolic process |
| B | 0008270 | molecular_function | zinc ion binding |
| B | 0016491 | molecular_function | oxidoreductase activity |
| B | 0046183 | biological_process | L-idonate catabolic process |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0050572 | molecular_function | L-idonate 5-dehydrogenase [NAD(P)+] activity |
| C | 0006020 | biological_process | inositol metabolic process |
| C | 0008270 | molecular_function | zinc ion binding |
| C | 0016491 | molecular_function | oxidoreductase activity |
| C | 0046183 | biological_process | L-idonate catabolic process |
| C | 0046872 | molecular_function | metal ion binding |
| C | 0050572 | molecular_function | L-idonate 5-dehydrogenase [NAD(P)+] activity |
| D | 0006020 | biological_process | inositol metabolic process |
| D | 0008270 | molecular_function | zinc ion binding |
| D | 0016491 | molecular_function | oxidoreductase activity |
| D | 0046183 | biological_process | L-idonate catabolic process |
| D | 0046872 | molecular_function | metal ion binding |
| D | 0050572 | molecular_function | L-idonate 5-dehydrogenase [NAD(P)+] activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CD A 500 |
| Chain | Residue |
| A | CYS131 |
| A | CYS134 |
| A | CYS137 |
| A | CYS145 |
| site_id | AC2 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE CD A 501 |
| Chain | Residue |
| A | HOH680 |
| A | HOH684 |
| A | CYS66 |
| A | HIS95 |
| A | GLU96 |
| A | GLU193 |
| A | HOH679 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CL A 502 |
| Chain | Residue |
| A | PHE141 |
| A | ASN143 |
| A | HIS144 |
| A | HIS345 |
| D | ARG333 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CD B 500 |
| Chain | Residue |
| B | CYS131 |
| B | CYS134 |
| B | CYS137 |
| B | CYS145 |
| site_id | AC5 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE CD B 501 |
| Chain | Residue |
| B | CYS66 |
| B | HIS95 |
| B | GLU96 |
| B | GLU193 |
| B | HOH514 |
| B | HOH645 |
| B | HOH685 |
| site_id | AC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CL B 502 |
| Chain | Residue |
| B | PHE141 |
| B | ASN143 |
| B | HIS345 |
| C | ARG333 |
| site_id | AC7 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL B 503 |
| Chain | Residue |
| B | ILE65 |
| B | GLY67 |
| B | PRO222 |
| B | VAL388 |
| B | LYS389 |
| B | VAL390 |
| site_id | AC8 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CD C 500 |
| Chain | Residue |
| C | CYS131 |
| C | CYS134 |
| C | CYS137 |
| C | CYS145 |
| site_id | AC9 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE CD C 501 |
| Chain | Residue |
| C | CYS66 |
| C | HIS95 |
| C | GLU96 |
| C | GLU193 |
| C | HOH516 |
| C | HOH681 |
| C | HOH686 |
| site_id | BC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CL C 502 |
| Chain | Residue |
| B | ARG333 |
| C | PHE141 |
| C | ASN143 |
| C | HIS144 |
| C | HIS345 |
| site_id | BC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CD D 500 |
| Chain | Residue |
| D | CYS131 |
| D | GLY132 |
| D | CYS134 |
| D | CYS137 |
| D | CYS145 |
| site_id | BC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CD D 501 |
| Chain | Residue |
| D | CYS66 |
| D | HIS95 |
| D | GLU96 |
| D | GLU193 |
| D | HOH682 |
| D | HOH683 |
| site_id | BC4 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CL D 502 |
| Chain | Residue |
| A | ARG333 |
| D | PHE141 |
| D | ASN143 |
| D | HIS144 |
| D | HIS345 |
Functional Information from PROSITE/UniProt
| site_id | PS00059 |
| Number of Residues | 15 |
| Details | ADH_ZINC Zinc-containing alcohol dehydrogenases signature. GHEfSGVvveaGpeA |
| Chain | Residue | Details |
| A | GLY94-ALA108 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 8 |
| Details | Active site: {"description":"Charge relay system","evidences":[{"source":"UniProtKB","id":"O58389","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 32 |
| Details | Binding site: {"evidences":[{"source":"Reference","evidenceCode":"ECO:0000305","citation":{"citationType":"submission","publicationDate":"AUG-2009","submissionDatabase":"PDB data bank","title":"Structure of putative alcohol dehydrogenase (TM_042) from Thermotoga maritima.","authors":["Ramagopal U.A.","Toro R.","Burley S.K.","Almo S.C."]}},{"source":"PDB","id":"3IP1","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 12 |
| Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"O58389","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
Catalytic Information from CSA
| site_id | CSA1 |
| Number of Residues | 2 |
| Details | Annotated By Reference To The Literature 1guf |
| Chain | Residue | Details |
| A | SER68 | |
| A | HIS71 |
| site_id | CSA2 |
| Number of Residues | 2 |
| Details | Annotated By Reference To The Literature 1guf |
| Chain | Residue | Details |
| B | SER68 | |
| B | HIS71 |
| site_id | CSA3 |
| Number of Residues | 2 |
| Details | Annotated By Reference To The Literature 1guf |
| Chain | Residue | Details |
| C | SER68 | |
| C | HIS71 |
| site_id | CSA4 |
| Number of Residues | 2 |
| Details | Annotated By Reference To The Literature 1guf |
| Chain | Residue | Details |
| D | SER68 | |
| D | HIS71 |
| site_id | CSA5 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1guf |
| Chain | Residue | Details |
| A | GLU77 |
| site_id | CSA6 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1guf |
| Chain | Residue | Details |
| B | GLU77 |
| site_id | CSA7 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1guf |
| Chain | Residue | Details |
| C | GLU77 |
| site_id | CSA8 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1guf |
| Chain | Residue | Details |
| D | GLU77 |
