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3IAY

Ternary complex of DNA polymerase delta

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0003676molecular_functionnucleic acid binding
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA T 17
ChainResidue
THOH51
THOH461
THOH462
THOH463

site_idAC2
Number of Residues20
DetailsBINDING SITE FOR RESIDUE DCP A 986
ChainResidue
APHE609
AASN610
ASER611
ALEU612
ATYR613
AARG674
ALYS701
AASN705
AASP764
AHOH1133
AHOH1269
AHOH1357
PDOC12
TDG4
TDG5
ACA1
ACA2
ACA3
AHOH11
AASP608

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA A 1
ChainResidue
ACA2
AASP608
APHE609
AASP764
ADCP986

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CA A 2
ChainResidue
ACA1
AASP608
AASP764
ADCP986
AHOH1071
AHOH1270
PDOC12

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 3
ChainResidue
AASP608
AGLU802
ADCP986
AHOH1271
AHOH1272
AHOH1378

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA A 4
ChainResidue
AASP321
AHOH1289
AHOH1290
AHOH1291
AHOH1314

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ACT A 987
ChainResidue
AGLN586
AHOH1232
AHOH1388

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT A 988
ChainResidue
AGLU185
AHIS189
AHOH1406
AHOH1407

Functional Information from PROSITE/UniProt
site_idPS00116
Number of Residues9
DetailsDNA_POLYMERASE_B DNA polymerase family B signature. YGDTDSVMV
ChainResidueDetails
ATYR760-VAL768

224201

PDB entries from 2024-08-28

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