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3I8D

The Pairing Geometry of the Hydrophobic Thymine Analog 2,4-Difluorotoluene in Duplex DNA as Analyzed by X-ray Crystallography

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
C0003676molecular_functionnucleic acid binding
C0004523molecular_functionRNA-DNA hybrid ribonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 601
ChainResidue
AHOH25
ATYR83
AVAL114
AHIS115
AARG118

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL C 602
ChainResidue
CHOH243
CGOL603
CHIS115
CARG118
CALA165
CHOH215

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL C 603
ChainResidue
CHIS115
CTYR119
CGLU122
CHOH197
CHOH217
CGOL602

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL C 604
ChainResidue
CGLY73
CSER74
CGLU82
CTYR193
DDG12

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"15989951","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

249697

PDB entries from 2026-02-25

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