Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3HY8

Crystal Structure of Human Pyridoxine 5'-Phosphate Oxidase R229W Mutant

Functional Information from GO Data
ChainGOidnamespacecontents
A0004733molecular_functionpyridoxamine phosphate oxidase activity
A0005515molecular_functionprotein binding
A0005739cellular_componentmitochondrion
A0005829cellular_componentcytosol
A0008615biological_processpyridoxine biosynthetic process
A0010181molecular_functionFMN binding
A0016491molecular_functionoxidoreductase activity
A0030170molecular_functionpyridoxal phosphate binding
A0042803molecular_functionprotein homodimerization activity
A0042816biological_processvitamin B6 metabolic process
A0042823biological_processpyridoxal phosphate biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues18
DetailsBINDING SITE FOR RESIDUE FMN A 390
ChainResidue
AARG95
ATYR132
AGLN139
AARG141
AGLN174
ATRP219
ATRP229
AHOH308
APLP350
APO4370
AMET96
ALEU97
ALEU98
APHE110
ATHR111
ASER115
AARG116
ALYS117

site_idAC2
Number of Residues10
DetailsBINDING SITE FOR RESIDUE PLP A 350
ChainResidue
AGLU77
ALEU98
ALYS100
AARG161
APRO162
ASER165
ATRP219
AARG225
AHIS227
AFMN390

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 A 360
ChainResidue
ALYS100
AGLY101
AARG108
APHE110
AGLU153
ATYR157

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 A 370
ChainResidue
AARG116
AARG141
AGLU143
AGLU217
ATRP229
AFMN390

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 A 380
ChainResidue
ASER55
ALYS60
ALYS60
AGLU251
AHOH297
AHOH320

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues10
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"12824491","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues5
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"P0AFI7","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1g79
ChainResidueDetails
AARG225

249697

PDB entries from 2026-02-25

PDB statisticsPDBj update infoContact PDBjnumon