3HJB
1.5 Angstrom Crystal Structure of Glucose-6-phosphate Isomerase from Vibrio cholerae.
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004347 | molecular_function | glucose-6-phosphate isomerase activity |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0006094 | biological_process | gluconeogenesis |
A | 0006096 | biological_process | glycolytic process |
A | 0016853 | molecular_function | isomerase activity |
A | 0048029 | molecular_function | monosaccharide binding |
A | 0051156 | biological_process | glucose 6-phosphate metabolic process |
A | 0097367 | molecular_function | carbohydrate derivative binding |
A | 1901135 | biological_process | carbohydrate derivative metabolic process |
B | 0004347 | molecular_function | glucose-6-phosphate isomerase activity |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0006094 | biological_process | gluconeogenesis |
B | 0006096 | biological_process | glycolytic process |
B | 0016853 | molecular_function | isomerase activity |
B | 0048029 | molecular_function | monosaccharide binding |
B | 0051156 | biological_process | glucose 6-phosphate metabolic process |
B | 0097367 | molecular_function | carbohydrate derivative binding |
B | 1901135 | biological_process | carbohydrate derivative metabolic process |
C | 0004347 | molecular_function | glucose-6-phosphate isomerase activity |
C | 0005737 | cellular_component | cytoplasm |
C | 0005829 | cellular_component | cytosol |
C | 0006094 | biological_process | gluconeogenesis |
C | 0006096 | biological_process | glycolytic process |
C | 0016853 | molecular_function | isomerase activity |
C | 0048029 | molecular_function | monosaccharide binding |
C | 0051156 | biological_process | glucose 6-phosphate metabolic process |
C | 0097367 | molecular_function | carbohydrate derivative binding |
C | 1901135 | biological_process | carbohydrate derivative metabolic process |
D | 0004347 | molecular_function | glucose-6-phosphate isomerase activity |
D | 0005737 | cellular_component | cytoplasm |
D | 0005829 | cellular_component | cytosol |
D | 0006094 | biological_process | gluconeogenesis |
D | 0006096 | biological_process | glycolytic process |
D | 0016853 | molecular_function | isomerase activity |
D | 0048029 | molecular_function | monosaccharide binding |
D | 0051156 | biological_process | glucose 6-phosphate metabolic process |
D | 0097367 | molecular_function | carbohydrate derivative binding |
D | 1901135 | biological_process | carbohydrate derivative metabolic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE CA A 551 |
Chain | Residue |
A | GLU62 |
A | HOH812 |
A | HOH921 |
A | HOH2078 |
A | HOH2216 |
A | HOH3413 |
C | HOH2469 |
site_id | AC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE CA A 552 |
Chain | Residue |
A | HOH2765 |
A | HOH2918 |
A | HOH3926 |
A | GLU168 |
A | HOH1387 |
site_id | AC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE CA A 553 |
Chain | Residue |
A | GLU253 |
A | HOH3373 |
A | HOH3833 |
A | HOH3984 |
A | HOH4115 |
site_id | AC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE CA A 554 |
Chain | Residue |
A | GLU332 |
A | HOH3970 |
B | GLY330 |
B | CA552 |
B | HOH4111 |
B | HOH4114 |
site_id | AC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CL A 555 |
Chain | Residue |
A | ARG95 |
A | ALA96 |
A | HOH1640 |
A | HOH2031 |
site_id | AC6 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE CL A 556 |
Chain | Residue |
A | ASN327 |
A | TYR371 |
A | GLN372 |
A | HOH1459 |
A | HOH1928 |
site_id | AC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CL A 557 |
Chain | Residue |
A | LYS127 |
A | MET261 |
A | GLU263 |
A | HOH1040 |
site_id | AC8 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE CL A 558 |
Chain | Residue |
A | GLN419 |
A | HOH598 |
B | ARG549 |
site_id | AC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CL A 559 |
Chain | Residue |
A | ASN175 |
A | GLY287 |
A | HOH1053 |
A | HOH1302 |
site_id | BC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CL A 560 |
Chain | Residue |
A | MET26 |
A | ASP27 |
A | HOH2211 |
A | HOH2711 |
site_id | BC2 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE CL A 561 |
Chain | Residue |
A | ALA452 |
A | HOH2855 |
site_id | BC3 |
Number of Residues | 13 |
Details | BINDING SITE FOR RESIDUE PG4 A 562 |
Chain | Residue |
A | GLN24 |
A | ASP25 |
A | GLY396 |
A | THR397 |
A | LYS398 |
A | LEU399 |
A | ASN467 |
A | ARG468 |
A | HOH2008 |
A | HOH2467 |
A | HOH2504 |
A | HOH3493 |
B | PEG561 |
site_id | BC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CA B 551 |
Chain | Residue |
B | GLU62 |
B | HOH638 |
B | HOH651 |
B | HOH1182 |
site_id | BC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE CA B 552 |
Chain | Residue |
A | GLY330 |
A | CA554 |
A | HOH3970 |
A | HOH3971 |
B | GLU332 |
B | HOH4111 |
site_id | BC6 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE CL B 553 |
Chain | Residue |
B | ARG95 |
B | ALA96 |
B | TRP267 |
B | HOH1188 |
B | HOH1869 |
site_id | BC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CL B 554 |
Chain | Residue |
B | ASN175 |
B | GLY287 |
B | HOH731 |
B | HOH1657 |
site_id | BC8 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CL B 555 |
Chain | Residue |
B | ASN327 |
B | TYR371 |
B | GLN372 |
B | HOH2282 |
site_id | BC9 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE CL B 556 |
Chain | Residue |
B | ASP266 |
B | HOH1729 |
B | HOH1869 |
B | HOH3152 |
B | HOH3651 |
site_id | CC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE CL B 557 |
Chain | Residue |
B | ASN104 |
B | ASN107 |
B | MET118 |
B | ASN122 |
B | HOH596 |
B | HOH3987 |
site_id | CC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE CL B 558 |
Chain | Residue |
B | PHE310 |
B | HOH1482 |
B | HOH2632 |
B | LYS72 |
B | LEU76 |
B | GLN77 |
site_id | CC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE CL B 559 |
Chain | Residue |
A | PHE32 |
A | HOH890 |
B | ASP535 |
B | SER536 |
B | HOH658 |
B | HOH1354 |
site_id | CC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE NA B 560 |
Chain | Residue |
B | HOH720 |
B | HOH1465 |
B | HOH1875 |
B | HOH2002 |
B | HOH3986 |
site_id | CC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE PEG B 561 |
Chain | Residue |
A | PG4562 |
B | TYR371 |
B | GLN372 |
B | HOH1094 |
site_id | CC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CA C 551 |
Chain | Residue |
C | GLU62 |
C | HOH617 |
C | HOH734 |
C | HOH1246 |
site_id | CC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CL C 552 |
Chain | Residue |
C | ARG95 |
C | ALA96 |
C | TRP267 |
C | HOH1993 |
site_id | CC8 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE CL C 553 |
Chain | Residue |
C | ASN175 |
C | GLY287 |
C | HOH636 |
site_id | CC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CL C 554 |
Chain | Residue |
C | ARG549 |
D | GLN419 |
D | HOH580 |
D | HOH714 |
site_id | DC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CL C 555 |
Chain | Residue |
C | ASN327 |
C | TYR371 |
C | GLN372 |
C | HOH1846 |
site_id | DC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE CL C 556 |
Chain | Residue |
C | SER410 |
C | ASN412 |
C | HOH624 |
C | HOH1255 |
D | GLY187 |
site_id | DC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE NA C 557 |
Chain | Residue |
C | HOH651 |
C | HOH1214 |
C | HOH1811 |
C | HOH3215 |
C | HOH3913 |
site_id | DC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE PEG C 558 |
Chain | Residue |
B | ARG105 |
B | SER106 |
B | ASN107 |
C | LYS450 |
C | HOH1379 |
C | HOH2803 |
site_id | DC5 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE PEG C 559 |
Chain | Residue |
B | ALA448 |
B | LYS450 |
B | HOH1842 |
C | ARG105 |
C | SER106 |
C | ASN107 |
C | HOH1326 |
C | HOH2774 |
C | HOH2888 |
C | HOH3994 |
site_id | DC6 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE PEG C 560 |
Chain | Residue |
C | VAL369 |
C | TYR371 |
C | GLN372 |
C | HOH818 |
D | THR397 |
D | PG4561 |
site_id | DC7 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE CA D 551 |
Chain | Residue |
B | HOH2124 |
D | GLU62 |
D | HOH811 |
D | HOH830 |
D | HOH2011 |
D | HOH2302 |
site_id | DC8 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE CA D 552 |
Chain | Residue |
D | GLU168 |
D | HOH1444 |
D | HOH1506 |
D | HOH2839 |
D | HOH3927 |
D | HOH3928 |
site_id | DC9 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE CA D 553 |
Chain | Residue |
D | GLU253 |
D | HOH2802 |
D | HOH3337 |
D | HOH3881 |
D | HOH3930 |
D | HOH3985 |
site_id | EC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CL D 554 |
Chain | Residue |
D | ARG95 |
D | ALA96 |
D | HOH1885 |
D | HOH2032 |
site_id | EC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE CL D 555 |
Chain | Residue |
D | ASN327 |
D | TYR371 |
D | GLN372 |
D | HOH1477 |
D | HOH1656 |
site_id | EC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE CL D 556 |
Chain | Residue |
D | ASN175 |
D | GLY287 |
D | HOH1031 |
D | HOH1418 |
D | HOH3873 |
site_id | EC4 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE CL D 557 |
Chain | Residue |
D | LYS127 |
D | MET261 |
D | GLU263 |
site_id | EC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE CL D 558 |
Chain | Residue |
D | MET26 |
D | ASP27 |
D | HOH2120 |
D | HOH3226 |
D | HOH3709 |
site_id | EC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CL D 559 |
Chain | Residue |
D | ILE89 |
D | PHE506 |
D | HOH565 |
D | HOH574 |
site_id | EC7 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE CL D 560 |
Chain | Residue |
D | ALA452 |
D | HOH2046 |
site_id | EC8 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE PG4 D 561 |
Chain | Residue |
C | PEG560 |
D | GLN24 |
D | GLY396 |
D | THR397 |
D | LEU399 |
D | ASN467 |
D | ARG468 |
D | HOH1814 |
D | HOH1882 |
D | HOH2122 |
D | HOH2505 |
D | HOH3887 |
Functional Information from PROSITE/UniProt
site_id | PS00174 |
Number of Residues | 18 |
Details | P_GLUCOSE_ISOMERASE_2 Phosphoglucose isomerase signature 2. GvIWnifsFDQwGVElgK |
Chain | Residue | Details |
A | GLY498-LYS515 |
site_id | PS00765 |
Number of Residues | 14 |
Details | P_GLUCOSE_ISOMERASE_1 Phosphoglucose isomerase signature 1. DwVGGRYSLwSAIG |
Chain | Residue | Details |
A | ASP266-GLY279 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | ACT_SITE: Proton donor => ECO:0000255|HAMAP-Rule:MF_00473 |
Chain | Residue | Details |
A | GLU356 | |
B | GLU356 | |
C | GLU356 | |
D | GLU356 |
site_id | SWS_FT_FI2 |
Number of Residues | 8 |
Details | ACT_SITE: ACT_SITE => ECO:0000255|HAMAP-Rule:MF_00473 |
Chain | Residue | Details |
A | HIS387 | |
A | LYS515 | |
B | HIS387 | |
B | LYS515 | |
C | HIS387 | |
C | LYS515 | |
D | HIS387 | |
D | LYS515 |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 6 |
Details | Annotated By Reference To The Literature 1dqr |
Chain | Residue | Details |
A | GLU215 | |
A | GLU356 | |
A | LYS209 | |
A | GLY270 | |
A | LYS515 | |
A | ARG271 |
site_id | CSA2 |
Number of Residues | 6 |
Details | Annotated By Reference To The Literature 1dqr |
Chain | Residue | Details |
B | GLU215 | |
B | GLU356 | |
B | LYS209 | |
B | GLY270 | |
B | LYS515 | |
B | ARG271 |
site_id | CSA3 |
Number of Residues | 6 |
Details | Annotated By Reference To The Literature 1dqr |
Chain | Residue | Details |
C | GLU215 | |
C | GLU356 | |
C | LYS209 | |
C | GLY270 | |
C | LYS515 | |
C | ARG271 |
site_id | CSA4 |
Number of Residues | 6 |
Details | Annotated By Reference To The Literature 1dqr |
Chain | Residue | Details |
D | GLU215 | |
D | GLU356 | |
D | LYS209 | |
D | GLY270 | |
D | LYS515 | |
D | ARG271 |
site_id | CSA5 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1dqr |
Chain | Residue | Details |
A | HIS387 |
site_id | CSA6 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1dqr |
Chain | Residue | Details |
B | HIS387 |
site_id | CSA7 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1dqr |
Chain | Residue | Details |
C | HIS387 |
site_id | CSA8 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1dqr |
Chain | Residue | Details |
D | HIS387 |