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3H8T

Structure of Porphyromonas gingivalis heme-binding protein HmuY in complex with Heme

Functional Information from GO Data
ChainGOidnamespacecontents
A0046872molecular_functionmetal ion binding
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues24
DetailsBINDING SITE FOR RESIDUE HEM A 301
ChainResidue
ATYR48
APHE156
APHE164
AHIS166
AALA169
ATYR173
ALYS204
AGOL506
AHOH664
AHOH901
AHOH903
AARG79
AHOH904
BHIS166
BGLY167
BPRO168
BHEM301
ATYR80
ATHR124
ATYR127
AMET129
AHIS134
AGLN154
AGLY155

site_idAC2
Number of Residues12
DetailsBINDING SITE FOR RESIDUE GOL A 503
ChainResidue
ATHR40
AVAL41
ATHR42
AHOH566
AHOH649
BTHR42
BASP196
BASP199
BALA200
BTHR208
BHOH632
BHOH876

site_idAC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 504
ChainResidue
ALYS47
ATHR50
AGLN52
AHOH832
BLYS47
BTHR50
BGLN52
BHOH878

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 505
ChainResidue
ALYS101
ATHR102
AGLU103
AHOH555
BASP66
BASN69

site_idAC5
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL A 506
ChainResidue
ATYR80
ALYS151
AGLY155
AALA157
APHE164
AHEM301
AHOH517
AHOH521
AHOH522
AHOH902

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 510
ChainResidue
ATHR112
AASP113
AGLY114
ATYR115
AARG183

site_idAC7
Number of Residues22
DetailsBINDING SITE FOR RESIDUE HEM B 301
ChainResidue
AGLY167
APRO168
AHEM301
BARG79
BTYR80
BTHR124
BTYR127
BMET129
BHIS134
BMET136
BGLN154
BGLY155
BPHE156
BPHE164
BHIS166
BALA169
BTYR173
BGOL502
BHOH573
BHOH575
BHOH576
BHOH768

site_idAC8
Number of Residues12
DetailsBINDING SITE FOR RESIDUE GOL B 501
ChainResidue
ATHR42
AASP196
AASP199
AALA200
ATHR208
AHOH565
BTHR40
BVAL41
BTHR42
BHOH633
BHOH741
BHOH877

site_idAC9
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL B 502
ChainResidue
BTYR80
BLYS151
BGLY155
BALA157
BPHE164
BHEM301
BHOH574
BHOH584
BHOH588
BHOH589

site_idBC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 B 507
ChainResidue
AASN152
ASER158
AHOH715
AHOH869
BASN152
BALA153
BSO4508

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 508
ChainResidue
AASN152
AALA153
BASN152
BSO4507
BHOH803
BHOH805

site_idBC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 509
ChainResidue
BASP113
BGLY114
BTYR115
BARG183
BHOH893

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PDB entries from 2024-07-31

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