3H7K

Crystal Structure of Arabidopsis thaliana Agmatine Deiminase Complexed with a Covalently Bound Reaction Intermediate

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0004668	molecular_function	protein-arginine deiminase activity
A	0006596	biological_process	polyamine biosynthetic process
A	0009446	biological_process	putrescine biosynthetic process
A	0016787	molecular_function	hydrolase activity
A	0033388	biological_process	putrescine biosynthetic process from arginine
A	0047632	molecular_function	agmatine deiminase activity

Functional Information from PDB Data

site_id	AC1
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG A 384

Chain	Residue
A	ASP119
A	TRP120
A	SER143
A	HOH508
A	HOH528
A	HOH531

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site_id	AC2
Number of Residues	7
Details	BINDING SITE FOR RESIDUE NA A 385

Chain	Residue
A	ASP220
A	ASN222
A	HOH513
A	HOH558
A	TRP125
A	ASP130
A	GLU219

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site_id	AC3
Number of Residues	1
Details	BINDING SITE FOR RESIDUE NA A 386

Chain	Residue
A	1PE391

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site_id	AC4
Number of Residues	5
Details	BINDING SITE FOR RESIDUE NA A 387

Chain	Residue
A	GLY217
A	THR305
A	ARG306
A	HOH452
A	HOH593

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site_id	AC5
Number of Residues	5
Details	BINDING SITE FOR RESIDUE CL A 388

Chain	Residue
A	LYS270
A	PRO300
A	LEU302
A	THR305
A	HOH495

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site_id	AC6
Number of Residues	1
Details	BINDING SITE FOR RESIDUE CL A 389

Chain	Residue
A	ARG269

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site_id	AC7
Number of Residues	2
Details	BINDING SITE FOR RESIDUE CL A 390

Chain	Residue
A	LYS52
A	GLY350

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site_id	AC8
Number of Residues	5
Details	BINDING SITE FOR RESIDUE 1PE A 391

Chain	Residue
A	ASP265
A	TYR283
A	MSE284
A	GLU286
A	NA386

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Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	1
Details	ACT_SITE: Amidino-cysteine intermediate => ECO:0000250|UniProtKB:Q837U5

Chain	Residue	Details
A	AGT366

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site_id	SWS_FT_FI2
Number of Residues	2
Details	BINDING: BINDING => ECO:0000250|UniProtKB:G7JT50

Chain	Residue	Details
A	ASP220
A	ASP226

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