Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3H5B

Crystal structure of wild type HIV-1 protease with novel P1'-ligand GRL-02031

Functional Information from GO Data
ChainGOidnamespacecontents
A0004190molecular_functionaspartic-type endopeptidase activity
A0006508biological_processproteolysis
B0004190molecular_functionaspartic-type endopeptidase activity
B0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA A 501
ChainResidue
AASP60
AHOH1036
AHOH1060
AHOH1073
AHOH1084
AHOH1139

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 511
ChainResidue
ATHR74
AASN88
BARG141

site_idAC3
Number of Residues27
DetailsBINDING SITE FOR RESIDUE 031 B 404
ChainResidue
AARG8
AASP25
AGLY27
AALA28
AASP29
AASP30
AGLY48
AGLY49
AILE50
AVAL82
AILE84
AHOH1037
BLEU123
BASP125
BGLY127
BALA128
BASP129
BASP130
BGLY148
BGLY149
BILE150
BPRO181
BVAL182
BILE184
BHOH1001
BHOH1113
BHOH1191

site_idAC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL B 512
ChainResidue
BTRP106

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 802
ChainResidue
AGLY94
AHOH1224
BTRP142
BVAL156
BARG157
BHOH1074

Functional Information from PROSITE/UniProt
site_idPS00141
Number of Residues12
DetailsASP_PROTEASE Eukaryotic and viral aspartyl proteases active site. ALLDTGADDTVI
ChainResidueDetails
AALA22-ILE33

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: For protease activity; shared with dimeric partner => ECO:0000255|PROSITE-ProRule:PRU10094
ChainResidueDetails
AASP25
BASP125

site_idSWS_FT_FI2
Number of Residues2
DetailsSITE: Cleavage; by viral protease => ECO:0000250
ChainResidueDetails
APHE99
BPHE199

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
AASP25
ATHR26

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
BTHR126
BASP125

site_idCSA3
Number of Residues1
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
AASP25

site_idCSA4
Number of Residues1
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
BASP125

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon