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3H30

Crystal structure of the catalytic subunit of human protein kinase CK2 with 5,6-dichloro-1-beta-D-ribofuranosylbenzimidazole

Replaces:  2RKP
Functional Information from GO Data
ChainGOidnamespacecontents
A0004672molecular_functionprotein kinase activity
A0004674molecular_functionprotein serine/threonine kinase activity
A0005524molecular_functionATP binding
A0006468biological_processprotein phosphorylation
B0004672molecular_functionprotein kinase activity
B0004674molecular_functionprotein serine/threonine kinase activity
B0005524molecular_functionATP binding
B0006468biological_processprotein phosphorylation
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE RFZ A 336
ChainResidue
ALEU45
AVAL53
AVAL116
AASN118
AMET163
AILE174
AHOH554

site_idAC2
Number of Residues14
DetailsBINDING SITE FOR RESIDUE RFZ A 337
ChainResidue
AARG19
AARG21
AGLN40
ALEU41
AILE69
AVAL101
AASP103
APRO104
AALA110
AHOH409
AHOH449
AHOH595
ATHR17
AHIS18

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 338
ChainResidue
AVAL11
AHIS148
AALA315

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 339
ChainResidue
ALYS68
AASP175
AHOH429

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 340
ChainResidue
APRO159
AHIS160

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 341
ChainResidue
ALYS77
AARG80
AARG155
ACL342

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 342
ChainResidue
AARG155
AGLU180
ACL341
AHOH553

site_idAC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 343
ChainResidue
AHOH401
AHOH565

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 344
ChainResidue
AHIS29
AVAL31
AGLU32
AGLU86

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 345
ChainResidue
APHE232
AHIS234
AARG244
AHOH513

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL A 346
ChainResidue
AVAL293
APRO295
BLYS198
BASN238
BHOH479

site_idBC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL A 347
ChainResidue
AASN238
AHOH446
AHOH575
AHOH578
BVAL293

site_idBC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 348
ChainResidue
ALYS303
ALEU313

site_idBC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 349
ChainResidue
AARG306
ATYR307
AHOH592

site_idBC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 350
ChainResidue
ATHR251
ATYR255
AARG275

site_idBC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 351
ChainResidue
AARG278
ALYS279
AARG280
AARG283

site_idBC8
Number of Residues12
DetailsBINDING SITE FOR RESIDUE RFZ B 336
ChainResidue
BGLY46
BARG47
BGLY48
BVAL53
BILE95
BVAL116
BASN117
BASN118
BILE174
BHOH473
BHOH575
BHOH640

site_idBC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL B 337
ChainResidue
BHIS148
BALA315

site_idCC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL B 338
ChainResidue
BARG80
BARG155

site_idCC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 339
ChainResidue
BARG155
BTYR188
BASN189

site_idCC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 340
ChainResidue
BLYS122
BPRO159
BHIS160

site_idCC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 341
ChainResidue
BLYS68
BASP175
BHOH575

site_idCC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL B 342
ChainResidue
AARG19
AHOH503
BLYS170
BHOH551

site_idCC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL B 343
ChainResidue
BHOH449
BHOH415

site_idCC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 344
ChainResidue
ALYS170
AHOH544
BARG19

site_idCC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CL B 345
ChainResidue
BLYS229
BPHE232
BHIS234
BARG244
BHOH384
BHOH536

site_idCC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL B 346
ChainResidue
AHOH643
BHIS321
BPRO322
BHOH556

site_idDC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 347
ChainResidue
BASP253
BARG278
BHOH546

site_idDC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL B 348
ChainResidue
ALYS329
AHOH658

site_idDC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL B 349
ChainResidue
BHIS29
BVAL31
BGLU32
BGLU86

site_idDC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL B 350
ChainResidue
AGLN40
BARG333

site_idDC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL B 351
ChainResidue
BARG19
BPRO20
BHOH616
BHOH649

site_idDC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 352
ChainResidue
BSER194
BARG195
BHOH565

site_idDC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL B 353
ChainResidue
BLYS303
BHIS321
BHOH366
BHOH456

Functional Information from PROSITE/UniProt
site_idPS00107
Number of Residues24
DetailsPROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. LGRGKYSEVFeAinitnnek..........VVVK
ChainResidueDetails
ALEU45-LYS68

site_idPS00108
Number of Residues13
DetailsPROTEIN_KINASE_ST Serine/Threonine protein kinases active-site signature. ImHrDVKphNVMI
ChainResidueDetails
AILE152-ILE164

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton acceptor
ChainResidueDetails
AASP156
BASP156

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00159
ChainResidueDetails
ALEU45
ALYS68
BLEU45
BLYS68

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1ir3
ChainResidueDetails
AASP156
AHIS160

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1ir3
ChainResidueDetails
BASP156
BHIS160

site_idCSA3
Number of Residues2
DetailsAnnotated By Reference To The Literature 1ir3
ChainResidueDetails
AASP156
ALYS158

site_idCSA4
Number of Residues2
DetailsAnnotated By Reference To The Literature 1ir3
ChainResidueDetails
BASP156
BLYS158

site_idCSA5
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ir3
ChainResidueDetails
AASP156
ALYS158
ASER194

site_idCSA6
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ir3
ChainResidueDetails
BASP156
BLYS158
BSER194

site_idCSA7
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ir3
ChainResidueDetails
AASP156
AASN161
ALYS158

site_idCSA8
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ir3
ChainResidueDetails
BASP156
BASN161
BLYS158

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PDB entries from 2024-07-17

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