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3H1U

Structure of ubiquitin in complex with Cd ions

Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CD A 77
ChainResidue
AGLU64
AHIS68
AHOH98

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CD A 78
ChainResidue
AMET1
AGLU16
AASP32
AHOH81

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CD A 79
ChainResidue
AASP21
ALYS29
AHOH80
AGLU18
AGLU18

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CD B 77
ChainResidue
BGLU18
BGLU18
BASP21
BLYS29
BHOH80

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CD B 78
ChainResidue
AGLY75
BMET1
BGLU16
BASP32

Functional Information from PROSITE/UniProt
site_idPS00299
Number of Residues26
DetailsUBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD
ChainResidueDetails
ALYS27-ASP52

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsSite: {"description":"Interacts with activating enzyme"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsSite: {"description":"Essential for function"}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine; by PINK1","evidences":[{"source":"UniProtKB","id":"P62987","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues16
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"UniProtKB","id":"P62987","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

247947

PDB entries from 2026-01-21

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