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3H03

Crystal structure of the binding domain of the AMPA subunit GluR2 bound to UBP277

Functional Information from GO Data
ChainGOidnamespacecontents
A0015276molecular_functionligand-gated monoatomic ion channel activity
A0016020cellular_componentmembrane
B0015276molecular_functionligand-gated monoatomic ion channel activity
B0016020cellular_componentmembrane
D0015276molecular_functionligand-gated monoatomic ion channel activity
D0016020cellular_componentmembrane
G0015276molecular_functionligand-gated monoatomic ion channel activity
G0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues14
DetailsBINDING SITE FOR RESIDUE UBP A 801
ChainResidue
ATYR61
AMET196
ATYR220
AHOH313
AHOH351
AHOH561
APRO89
ALEU90
ATHR91
AARG96
ATHR174
ATYR190
ALEU192
AGLU193

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ZN A 1
ChainResidue
AGLU42
AHIS46

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ZN A 262
ChainResidue
AHIS23
BHOH673

site_idAC4
Number of Residues14
DetailsBINDING SITE FOR RESIDUE UBP B 802
ChainResidue
BTYR61
BPRO89
BLEU90
BTHR91
BARG96
BTHR174
BTYR190
BLEU192
BGLU193
BMET196
BTYR220
BHOH329
BHOH344
BHOH680

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ZN B 3
ChainResidue
BGLU42
BHIS46

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN B 262
ChainResidue
AASP139
BHIS23
BGLU24

site_idAC7
Number of Residues14
DetailsBINDING SITE FOR RESIDUE UBP D 803
ChainResidue
DTYR61
DPRO89
DLEU90
DTHR91
DARG96
DTHR174
DTYR190
DLEU192
DGLU193
DMET196
DTYR220
DHOH289
DHOH303
DHOH344

site_idAC8
Number of Residues1
DetailsBINDING SITE FOR RESIDUE ZN D 2
ChainResidue
DHIS23

site_idAC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ZN D 262
ChainResidue
DGLU42
DHIS46

site_idBC1
Number of Residues14
DetailsBINDING SITE FOR RESIDUE UBP G 804
ChainResidue
GTYR61
GPRO89
GLEU90
GTHR91
GARG96
GTHR174
GTYR190
GLEU192
GGLU193
GMET196
GTYR220
GHOH313
GHOH325
GHOH776

site_idBC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ZN G 262
ChainResidue
GGLU42
GHIS46

site_idBC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN G 263
ChainResidue
DASP139
GHIS23
GGLU24

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues24
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"11086992","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16483599","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1FTJ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2CMO","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues12
DetailsSite: {"description":"Interaction with the cone snail toxin Con-ikot-ikot","evidences":[{"source":"PubMed","id":"25103405","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues4
DetailsSite: {"description":"Crucial to convey clamshell closure to channel opening","evidences":[{"source":"PubMed","id":"25103405","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues4
DetailsModified residue: {"description":"Phosphoserine; by PKC","evidences":[{"source":"PubMed","id":"8848293","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues4
DetailsModified residue: {"description":"Phosphoserine; by PKG","evidences":[{"source":"PubMed","id":"8848293","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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