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3GYH

Crystal Structure Analysis of S. Pombe ATL in complex with damaged DNA containing POB

Functional Information from GO Data
ChainGOidnamespacecontents
X0003677molecular_functionDNA binding
X0003684molecular_functiondamaged DNA binding
X0003824molecular_functioncatalytic activity
X0003908molecular_functionmethylated-DNA-[protein]-cysteine S-methyltransferase activity
X0005634cellular_componentnucleus
X0005829cellular_componentcytosol
X0006281biological_processDNA repair
X0006283biological_processtranscription-coupled nucleotide-excision repair
X0032132molecular_functionO6-alkylguanine-DNA binding
X0070911biological_processglobal genome nucleotide-excision repair
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE PBO Y 200
ChainResidue
XMET45
XLEU48
XPRO50
XTRP56
XARG77
XARG81
YDG207
YDG211

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsSITE: Required for phosphate rotation/nucleotide flipping => ECO:0000305|PubMed:19516334
ChainResidueDetails
XTYR25

site_idSWS_FT_FI2
Number of Residues1
DetailsSITE: Arg finger, required for nucleotide flipping => ECO:0000305|PubMed:19516334
ChainResidueDetails
XARG39

site_idSWS_FT_FI3
Number of Residues1
DetailsSITE: Critical for recognition of O(6)-alkylguanines, probes the electrostatic potential of the flipped base to distinguish between O(6)-alkylguanine and guanine => ECO:0000269|PubMed:23112169
ChainResidueDetails
XARG69

224931

PDB entries from 2024-09-11

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