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3GV9

AmpC beta-lactamase in complex with Fragment-based Inhibitor

Functional Information from GO Data
ChainGOidnamespacecontents
A0008800molecular_functionbeta-lactamase activity
A0016787molecular_functionhydrolase activity
A0017001biological_processantibiotic catabolic process
A0030288cellular_componentouter membrane-bounded periplasmic space
A0042597cellular_componentperiplasmic space
A0046677biological_processresponse to antibiotic
B0008800molecular_functionbeta-lactamase activity
B0016787molecular_functionhydrolase activity
B0017001biological_processantibiotic catabolic process
B0030288cellular_componentouter membrane-bounded periplasmic space
B0042597cellular_componentperiplasmic space
B0046677biological_processresponse to antibiotic
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GV9 A 1
ChainResidue
ASER64
AGLN120
AASN152
AGLY317
AALA318
AHOH497

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE PO4 A 362
ChainResidue
ALYS84
ALYS91

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GV9 A 363
ChainResidue
ALYS164
APRO165
AHOH702
BVAL278
BASN279
BPRO280
ATYR92

site_idAC4
Number of Residues11
DetailsBINDING SITE FOR RESIDUE GV9 A 364
ChainResidue
AVAL125
ALYS126
ASER127
AGLY214
AALA215
ALEU216
APEG365
AHOH366
AHOH448
AHOH848
AHOH849

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE PEG A 365
ChainResidue
ATRP93
ALEU131
AALA160
ALYS164
AGV9364
AHOH366
BASP281

site_idAC6
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GV9 B 1
ChainResidue
BPO43
BSER64
BGLN120
BASN152
BGLY317
BALA318
BDMS363
BHOH421

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PO4 B 2
ChainResidue
AARG14
BARG80
BHOH396
BHOH511
BHOH956

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 B 3
ChainResidue
BGV91
BALA318
BTHR319
BASN343
BDMS363
BHOH746

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE DMS B 362
ChainResidue
BTRP93
BLEU131
BLEU157
BLYS164

site_idBC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE DMS B 363
ChainResidue
BGV91
BPO43
BLEU119
BGLN120
BLEU293

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PEG B 364
ChainResidue
AALA141
ATRP142
BTHR17
BPRO18
BGLU21
BHOH902

site_idBC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE DMS B 365
ChainResidue
AGLN56
AHOH846
BASN289
BLEU293
BHOH500

site_idBC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE PEG B 366
ChainResidue
BLYS84
BHOH469

Functional Information from PROSITE/UniProt
site_idPS00336
Number of Residues8
DetailsBETA_LACTAMASE_C Beta-lactamase class-C active site. FELGSVSK
ChainResidueDetails
APHE60-LYS67

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Acyl-ester intermediate => ECO:0000255|PROSITE-ProRule:PRU10102, ECO:0000269|PubMed:6795623
ChainResidueDetails
ASER64
BSER64

site_idSWS_FT_FI2
Number of Residues2
DetailsACT_SITE: Proton acceptor
ChainResidueDetails
ATYR150
BTYR150

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
ALYS315
BLYS315

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PDB entries from 2024-05-15

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