3GNC
Crystal structure of Glutaryl-COA dehydrogenase from Burkholderia Pseudomallei with fragment 6421
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000062 | molecular_function | fatty-acyl-CoA binding |
| A | 0003995 | molecular_function | acyl-CoA dehydrogenase activity |
| A | 0004361 | molecular_function | glutaryl-CoA dehydrogenase activity |
| A | 0016491 | molecular_function | oxidoreductase activity |
| A | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
| A | 0033539 | biological_process | fatty acid beta-oxidation using acyl-CoA dehydrogenase |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0046949 | biological_process | fatty-acyl-CoA biosynthetic process |
| A | 0050660 | molecular_function | flavin adenine dinucleotide binding |
| B | 0000062 | molecular_function | fatty-acyl-CoA binding |
| B | 0003995 | molecular_function | acyl-CoA dehydrogenase activity |
| B | 0004361 | molecular_function | glutaryl-CoA dehydrogenase activity |
| B | 0016491 | molecular_function | oxidoreductase activity |
| B | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
| B | 0033539 | biological_process | fatty acid beta-oxidation using acyl-CoA dehydrogenase |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0046949 | biological_process | fatty-acyl-CoA biosynthetic process |
| B | 0050660 | molecular_function | flavin adenine dinucleotide binding |
| C | 0000062 | molecular_function | fatty-acyl-CoA binding |
| C | 0003995 | molecular_function | acyl-CoA dehydrogenase activity |
| C | 0004361 | molecular_function | glutaryl-CoA dehydrogenase activity |
| C | 0016491 | molecular_function | oxidoreductase activity |
| C | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
| C | 0033539 | biological_process | fatty acid beta-oxidation using acyl-CoA dehydrogenase |
| C | 0046872 | molecular_function | metal ion binding |
| C | 0046949 | biological_process | fatty-acyl-CoA biosynthetic process |
| C | 0050660 | molecular_function | flavin adenine dinucleotide binding |
| D | 0000062 | molecular_function | fatty-acyl-CoA binding |
| D | 0003995 | molecular_function | acyl-CoA dehydrogenase activity |
| D | 0004361 | molecular_function | glutaryl-CoA dehydrogenase activity |
| D | 0016491 | molecular_function | oxidoreductase activity |
| D | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
| D | 0033539 | biological_process | fatty acid beta-oxidation using acyl-CoA dehydrogenase |
| D | 0046872 | molecular_function | metal ion binding |
| D | 0046949 | biological_process | fatty-acyl-CoA biosynthetic process |
| D | 0050660 | molecular_function | flavin adenine dinucleotide binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE SO4 A 396 |
| Chain | Residue |
| A | LYS331 |
| A | ARG332 |
| A | CYS335 |
| A | ASN371 |
| A | HIS380 |
| A | HOH424 |
| A | HOH442 |
| site_id | AC2 |
| Number of Residues | 10 |
| Details | BINDING SITE FOR RESIDUE QQQ A 397 |
| Chain | Residue |
| A | SER101 |
| A | LEU216 |
| A | LEU250 |
| A | ILE257 |
| A | VAL370 |
| A | TYR373 |
| A | GLU374 |
| A | HOH408 |
| A | ARG97 |
| A | SER98 |
| site_id | AC3 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE QQQ B 396 |
| Chain | Residue |
| B | ARG97 |
| B | SER98 |
| B | SER101 |
| B | LEU216 |
| B | ILE257 |
| B | VAL370 |
| B | TYR373 |
| B | GLU374 |
| B | HOH425 |
| site_id | AC4 |
| Number of Residues | 10 |
| Details | BINDING SITE FOR RESIDUE QQQ C 396 |
| Chain | Residue |
| C | ARG97 |
| C | SER98 |
| C | SER101 |
| C | LEU216 |
| C | LEU250 |
| C | ILE257 |
| C | VAL370 |
| C | TYR373 |
| C | GLU374 |
| C | HOH409 |
| site_id | AC5 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE QQQ D 396 |
| Chain | Residue |
| D | ARG97 |
| D | SER98 |
| D | SER101 |
| D | LEU216 |
| D | ILE257 |
| D | VAL370 |
| D | TYR373 |
| D | GLU374 |
| D | HOH428 |
| site_id | AC6 |
| Number of Residues | 11 |
| Details | BINDING SITE FOR RESIDUE EPE D 397 |
| Chain | Residue |
| B | LYS295 |
| B | ASP347 |
| D | LYS331 |
| D | ARG332 |
| D | CYS335 |
| D | GLY336 |
| D | ASN371 |
| D | ASP378 |
| D | HIS380 |
| D | HOH411 |
| D | HOH449 |
| site_id | AC7 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE EPE C 397 |
| Chain | Residue |
| C | LYS331 |
| C | ARG332 |
| C | CYS335 |
| C | ASN371 |
| C | ASP378 |
| C | HIS380 |
| C | HOH406 |
| C | HOH410 |
| site_id | AC8 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE EPE B 397 |
| Chain | Residue |
| B | LYS331 |
| B | ARG332 |
| B | CYS335 |
| B | ASN371 |
| B | ASP378 |
| B | HIS380 |
| B | HOH403 |
| B | HOH442 |
Functional Information from PROSITE/UniProt
| site_id | PS00073 |
| Number of Residues | 20 |
| Details | ACYL_COA_DH_2 Acyl-CoA dehydrogenases signature 2. DmLGGnGIsdEfgvaRhlvN |
| Chain | Residue | Details |
| A | ASP347-ASN366 |
Catalytic Information from CSA
| site_id | CSA1 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ivh |
| Chain | Residue | Details |
| A | ALA253 |
| site_id | CSA2 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ivh |
| Chain | Residue | Details |
| B | ALA253 |
| site_id | CSA3 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ivh |
| Chain | Residue | Details |
| C | ALA253 |
| site_id | CSA4 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ivh |
| Chain | Residue | Details |
| D | ALA253 |
| site_id | CSA5 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ivh |
| Chain | Residue | Details |
| A | GLU374 |
| site_id | CSA6 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ivh |
| Chain | Residue | Details |
| B | GLU374 |
| site_id | CSA7 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ivh |
| Chain | Residue | Details |
| C | GLU374 |
| site_id | CSA8 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ivh |
| Chain | Residue | Details |
| D | GLU374 |
