3GFS
Structure of YhdA, K109D/D137K variant
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005829 | cellular_component | cytosol |
A | 0010181 | molecular_function | FMN binding |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0042802 | molecular_function | identical protein binding |
B | 0005829 | cellular_component | cytosol |
B | 0010181 | molecular_function | FMN binding |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0042802 | molecular_function | identical protein binding |
C | 0005829 | cellular_component | cytosol |
C | 0010181 | molecular_function | FMN binding |
C | 0016491 | molecular_function | oxidoreductase activity |
C | 0042802 | molecular_function | identical protein binding |
D | 0005829 | cellular_component | cytosol |
D | 0010181 | molecular_function | FMN binding |
D | 0016491 | molecular_function | oxidoreductase activity |
D | 0042802 | molecular_function | identical protein binding |
E | 0005829 | cellular_component | cytosol |
E | 0010181 | molecular_function | FMN binding |
E | 0016491 | molecular_function | oxidoreductase activity |
E | 0042802 | molecular_function | identical protein binding |
F | 0005829 | cellular_component | cytosol |
F | 0010181 | molecular_function | FMN binding |
F | 0016491 | molecular_function | oxidoreductase activity |
F | 0042802 | molecular_function | identical protein binding |
G | 0005829 | cellular_component | cytosol |
G | 0010181 | molecular_function | FMN binding |
G | 0016491 | molecular_function | oxidoreductase activity |
G | 0042802 | molecular_function | identical protein binding |
H | 0005829 | cellular_component | cytosol |
H | 0010181 | molecular_function | FMN binding |
H | 0016491 | molecular_function | oxidoreductase activity |
H | 0042802 | molecular_function | identical protein binding |
I | 0005829 | cellular_component | cytosol |
I | 0010181 | molecular_function | FMN binding |
I | 0016491 | molecular_function | oxidoreductase activity |
I | 0042802 | molecular_function | identical protein binding |
J | 0005829 | cellular_component | cytosol |
J | 0010181 | molecular_function | FMN binding |
J | 0016491 | molecular_function | oxidoreductase activity |
J | 0042802 | molecular_function | identical protein binding |
K | 0005829 | cellular_component | cytosol |
K | 0010181 | molecular_function | FMN binding |
K | 0016491 | molecular_function | oxidoreductase activity |
K | 0042802 | molecular_function | identical protein binding |
L | 0005829 | cellular_component | cytosol |
L | 0010181 | molecular_function | FMN binding |
L | 0016491 | molecular_function | oxidoreductase activity |
L | 0042802 | molecular_function | identical protein binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE FMN A 200 |
Chain | Residue |
A | THR9 |
A | SER76 |
A | VAL104 |
A | ALA105 |
A | GLY106 |
A | GLY107 |
A | GLY110 |
A | HOH281 |
C | ASP87 |
A | ARG11 |
A | GLY14 |
A | ARG15 |
A | THR16 |
A | PRO72 |
A | GLU73 |
A | TYR74 |
A | HIS75 |
site_id | AC2 |
Number of Residues | 16 |
Details | BINDING SITE FOR RESIDUE FMN B 200 |
Chain | Residue |
B | THR9 |
B | ARG11 |
B | GLY14 |
B | ARG15 |
B | THR16 |
B | PRO72 |
B | GLU73 |
B | TYR74 |
B | HIS75 |
B | SER76 |
B | VAL104 |
B | ALA105 |
B | GLY106 |
B | GLY107 |
B | GLY110 |
D | ASP87 |
site_id | AC3 |
Number of Residues | 19 |
Details | BINDING SITE FOR RESIDUE FMN C 200 |
Chain | Residue |
A | ASP87 |
C | THR9 |
C | ARG11 |
C | GLY14 |
C | ARG15 |
C | THR16 |
C | PRO72 |
C | GLU73 |
C | TYR74 |
C | HIS75 |
C | SER76 |
C | VAL104 |
C | ALA105 |
C | GLY106 |
C | GLY107 |
C | GLY110 |
C | HOH576 |
C | HOH616 |
F | GLU50 |
site_id | AC4 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE FMN D 200 |
Chain | Residue |
B | ASP87 |
D | THR9 |
D | ARG11 |
D | GLY14 |
D | ARG15 |
D | THR16 |
D | PRO72 |
D | GLU73 |
D | TYR74 |
D | HIS75 |
D | SER76 |
D | VAL104 |
D | ALA105 |
D | GLY106 |
D | GLY110 |
D | HOH312 |
E | HOH529 |
site_id | AC5 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE FMN E 200 |
Chain | Residue |
E | THR9 |
E | ARG11 |
E | GLY14 |
E | ARG15 |
E | THR16 |
E | PRO72 |
E | GLU73 |
E | TYR74 |
E | HIS75 |
E | SER76 |
E | VAL104 |
E | ALA105 |
E | GLY106 |
E | GLY107 |
E | GLY110 |
E | HOH581 |
F | ASP87 |
site_id | AC6 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE FMN F 200 |
Chain | Residue |
F | GLY106 |
F | GLY107 |
F | GLY110 |
F | HOH482 |
E | ASP87 |
F | THR9 |
F | ARG11 |
F | GLY14 |
F | ARG15 |
F | THR16 |
F | PRO72 |
F | GLU73 |
F | TYR74 |
F | HIS75 |
F | SER76 |
F | VAL104 |
F | ALA105 |
site_id | AC7 |
Number of Residues | 16 |
Details | BINDING SITE FOR RESIDUE FMN G 200 |
Chain | Residue |
G | THR9 |
G | ARG11 |
G | GLY14 |
G | ARG15 |
G | THR16 |
G | PRO72 |
G | GLU73 |
G | TYR74 |
G | HIS75 |
G | SER76 |
G | VAL104 |
G | ALA105 |
G | GLY106 |
G | GLY110 |
G | HOH394 |
H | ASP87 |
site_id | AC8 |
Number of Residues | 18 |
Details | BINDING SITE FOR RESIDUE FMN H 200 |
Chain | Residue |
G | ASP87 |
H | THR9 |
H | ARG11 |
H | GLY14 |
H | ARG15 |
H | THR16 |
H | PRO72 |
H | GLU73 |
H | TYR74 |
H | HIS75 |
H | SER76 |
H | VAL104 |
H | ALA105 |
H | GLY106 |
H | GLY107 |
H | GLY110 |
H | HOH692 |
H | HOH940 |
site_id | AC9 |
Number of Residues | 18 |
Details | BINDING SITE FOR RESIDUE FMN I 200 |
Chain | Residue |
I | THR9 |
I | ARG11 |
I | GLY14 |
I | ARG15 |
I | THR16 |
I | PRO72 |
I | GLU73 |
I | TYR74 |
I | HIS75 |
I | SER76 |
I | VAL104 |
I | ALA105 |
I | GLY106 |
I | GLY107 |
I | GLY110 |
I | HOH422 |
I | HOH463 |
J | ASP87 |
site_id | BC1 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE FMN J 200 |
Chain | Residue |
I | ASP87 |
J | THR9 |
J | ARG11 |
J | GLY14 |
J | ARG15 |
J | THR16 |
J | PRO72 |
J | GLU73 |
J | TYR74 |
J | HIS75 |
J | SER76 |
J | VAL104 |
J | ALA105 |
J | GLY106 |
J | GLY107 |
J | GLY110 |
J | HOH708 |
site_id | BC2 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE FMN K 200 |
Chain | Residue |
K | THR9 |
K | ARG11 |
K | GLY14 |
K | ARG15 |
K | THR16 |
K | PRO72 |
K | GLU73 |
K | TYR74 |
K | HIS75 |
K | SER76 |
K | VAL104 |
K | ALA105 |
K | GLY106 |
K | GLY107 |
L | ASP87 |
site_id | BC3 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE FMN L 200 |
Chain | Residue |
K | ASP87 |
L | THR9 |
L | ARG11 |
L | GLY14 |
L | ARG15 |
L | THR16 |
L | PRO72 |
L | GLU73 |
L | TYR74 |
L | HIS75 |
L | SER76 |
L | VAL104 |
L | ALA105 |
L | GLY106 |
L | GLY107 |
L | GLY110 |
L | HOH528 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 48 |
Details | BINDING: BINDING => ECO:0000269|Ref.6, ECO:0000269|Ref.7 |
Chain | Residue | Details |
A | THR9 | |
C | ARG15 | |
C | GLU73 | |
C | GLY106 | |
D | THR9 | |
D | ARG15 | |
D | GLU73 | |
D | GLY106 | |
E | THR9 | |
E | ARG15 | |
E | GLU73 | |
A | ARG15 | |
E | GLY106 | |
F | THR9 | |
F | ARG15 | |
F | GLU73 | |
F | GLY106 | |
G | THR9 | |
G | ARG15 | |
G | GLU73 | |
G | GLY106 | |
H | THR9 | |
A | GLU73 | |
H | ARG15 | |
H | GLU73 | |
H | GLY106 | |
I | THR9 | |
I | ARG15 | |
I | GLU73 | |
I | GLY106 | |
J | THR9 | |
J | ARG15 | |
J | GLU73 | |
A | GLY106 | |
J | GLY106 | |
K | THR9 | |
K | ARG15 | |
K | GLU73 | |
K | GLY106 | |
L | THR9 | |
L | ARG15 | |
L | GLU73 | |
L | GLY106 | |
B | THR9 | |
B | ARG15 | |
B | GLU73 | |
B | GLY106 | |
C | THR9 |