3G7D
Native PhpD with Cadmium Atoms
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003677 | molecular_function | DNA binding |
| A | 0008198 | molecular_function | ferrous iron binding |
| A | 0016702 | molecular_function | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen |
| A | 0017000 | biological_process | antibiotic biosynthetic process |
| A | 0032923 | biological_process | organic phosphonate biosynthetic process |
| A | 0042802 | molecular_function | identical protein binding |
| A | 0042803 | molecular_function | protein homodimerization activity |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0051213 | molecular_function | dioxygenase activity |
| A | 0055114 | biological_process | obsolete oxidation-reduction process |
| A | 1901766 | biological_process | phosphinothricin biosynthetic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CD A 500 |
| Chain | Residue |
| A | CYS180 |
| A | CD501 |
| A | HOH697 |
| A | HOH772 |
| site_id | AC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE CD A 501 |
| Chain | Residue |
| A | CYS180 |
| A | CD500 |
| A | HOH658 |
| site_id | AC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE CD A 502 |
| Chain | Residue |
| A | HIS397 |
| A | ASP189 |
| A | GLU368 |
| site_id | AC4 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE CD A 503 |
| Chain | Residue |
| A | GLU80 |
| A | HOH714 |
| A | HOH761 |
| site_id | AC5 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CD A 504 |
| Chain | Residue |
| A | ASP32 |
| A | ASP309 |
| A | HOH525 |
| A | HOH642 |
| A | HOH758 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE CD A 505 |
| Chain | Residue |
| A | HIS94 |
| A | HOH623 |
| A | HOH759 |
| site_id | AC7 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CD A 506 |
| Chain | Residue |
| A | HIS10 |
| A | GLU131 |
| A | HOH467 |
| A | HOH534 |
| A | HOH538 |
| A | HOH784 |
| site_id | AC8 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CD A 507 |
| Chain | Residue |
| A | ASP142 |
| A | HIS160 |
| A | HIS163 |
| A | HOH466 |
| A | HOH477 |
| site_id | AC9 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE CD A 508 |
| Chain | Residue |
| A | ASP66 |
| A | HOH551 |
| site_id | BC1 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE CD A 509 |
| Chain | Residue |
| A | HIS75 |
| site_id | BC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CD A 510 |
| Chain | Residue |
| A | GLU209 |
| A | HIS410 |
| A | HOH605 |
| A | HOH773 |
| site_id | BC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE CD A 511 |
| Chain | Residue |
| A | GLN296 |
| A | HIS330 |
| A | HOH444 |
| site_id | BC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CD A 512 |
| Chain | Residue |
| A | HIS129 |
| A | GLU176 |
| A | HIS182 |
| A | HOH793 |
| A | HOH794 |
| A | HOH795 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 39 |
| Details | DNA_BIND: H-T-H motif => ECO:0000250 |
| Chain | Residue | Details |
| A | ALA19-GLY38 | |
| A | THR245-ARG265 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 1 |
| Details | BINDING: BINDING => ECO:0007744|PDB:3GBF |
| Chain | Residue | Details |
| A | LYS16 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 5 |
| Details | BINDING: in other chain => ECO:0007744|PDB:3GBF |
| Chain | Residue | Details |
| A | TYR98 | |
| A | ASN126 | |
| A | GLU176 | |
| A | HIS182 | |
| A | SER196 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 1 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:19516340, ECO:0000269|PubMed:21711001, ECO:0007744|PDB:3G7D, ECO:0007744|PDB:3GBF, ECO:0007744|PDB:3RZZ |
| Chain | Residue | Details |
| A | HIS129 |
