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Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

3G78

Insight into group II intron catalysis from revised crystal structure

Functional Information from PDB Data

site_id	AC1
Number of Residues	5
Details	BINDING SITE FOR RESIDUE MG Z 10

Chain	Residue
A	U375
A	C377
A	HOH588
Z	U6
Z	U7

site_id	AC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG Z 11

Chain	Residue
A	C358
A	G359
A	C377
Z	U7

site_id	AC3
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG Z 12

Chain	Residue
Z	U6
Z	U7

site_id	AC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG A 413

Chain	Residue
A	G5
A	A287
A	A380
A	HOH739

site_id	AC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG A 414

Chain	Residue
A	G3
A	U4
A	HOH670

site_id	AC6
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG A 415

Chain	Residue
A	G14
A	G15
A	U256

site_id	AC7
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 417

Chain	Residue
A	HOH752

site_id	AC8
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG A 418

Chain	Residue
A	C289
A	G385
A	G386
A	HOH704

site_id	AC9
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 419

Chain	Residue
A	HOH549
A	HOH564

site_id	BC1
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG A 420

Chain	Residue
A	A290
A	HOH508
A	HOH704

site_id	BC2
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 421

Chain	Residue
A	G173

site_id	BC3
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 422

Chain	Residue
A	A50
A	HOH673

site_id	BC4
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG A 423

Chain	Residue
A	C360
A	G374
A	HOH692
A	HOH697
A	HOH747
A	HOH835

site_id	BC5
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 426

Chain	Residue
A	A260
A	HOH618

site_id	BC6
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG A 427

Chain	Residue
A	G142
A	A144
A	C145

site_id	BC7
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 428

Chain	Residue
A	G325
A	HOH492

site_id	BC8
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG A 429

Chain	Residue
A	U59
A	HOH593
A	HOH766
A	HOH814

site_id	BC9
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 430

Chain	Residue
A	HOH519

site_id	CC1
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG A 432

Chain	Residue
A	G107
A	HOH507
A	HOH597
A	HOH711

site_id	CC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG A 433

Chain	Residue
A	C372
A	HOH499
A	HOH554
A	HOH836

site_id	CC3
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG A 434

Chain	Residue
A	G378
A	HOH652
A	HOH838

site_id	CC4
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG A 435

Chain	Residue
A	C119
A	A174
A	G239
A	HOH488
A	HOH653
A	HOH839

site_id	CC5
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG A 436

Chain	Residue
A	U285
A	HOH563
A	HOH598
A	HOH693

site_id	CC6
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG A 437

Chain	Residue
A	A186
A	HOH569
A	HOH762

site_id	CC7
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG A 438

Chain	Residue
A	G269
A	HOH505
A	HOH573
A	HOH608

site_id	CC8
Number of Residues	5
Details	BINDING SITE FOR RESIDUE MG A 439

Chain	Residue
A	A355
A	A356
A	HOH576
A	HOH577
A	HOH793

site_id	CC9
Number of Residues	5
Details	BINDING SITE FOR RESIDUE MG A 440

Chain	Residue
A	G275
A	HOH524
A	HOH560
A	HOH601
A	HOH679

site_id	DC1
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG A 441

Chain	Residue
A	A105
A	HOH645
A	HOH717

site_id	DC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG A 442

Chain	Residue
A	G136
A	U225
A	HOH526
A	HOH634

site_id	DC3
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG A 443

Chain	Residue
A	HOH510
A	HOH713
A	U66
A	A67

site_id	DC4
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 444

Chain	Residue
A	HOH540

site_id	DC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG A 445

Chain	Residue
A	A181
A	A222
A	A223

site_id	DC6
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 446

Chain	Residue
A	G111
A	HOH631

site_id	DC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG A 447

Chain	Residue
A	HOH699
A	HOH864
A	HOH886

site_id	DC8
Number of Residues	5
Details	BINDING SITE FOR RESIDUE MG A 448

Chain	Residue
A	G266
A	G267
A	HOH591
A	HOH695
A	HOH798

site_id	DC9
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG A 449

Chain	Residue
A	G118
A	C119
A	HOH794

site_id	EC1
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 450

Chain	Residue
A	C6

site_id	EC2
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 451

Chain	Residue
A	HOH702

site_id	EC3
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 452

Chain	Residue
A	G275
A	A276

site_id	EC4
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG A 453

Chain	Residue
A	G52
A	HOH531
A	HOH582

site_id	EC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG A 454

Chain	Residue
A	G169
A	HOH650
A	HOH764

site_id	EC6
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG A 455

Chain	Residue
A	A60
A	C197
A	U198

site_id	EC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG A 456

Chain	Residue
A	A290
A	G354
A	G388

site_id	EC8
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 457

Chain	Residue
A	C201

site_id	EC9
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 458

Chain	Residue
A	C40
A	G41

site_id	FC1
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG A 459

Chain	Residue
A	A61
A	C62
A	HOH615

site_id	FC2
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 460

Chain	Residue
A	HOH800

site_id	FC3
Number of Residues	4
Details	BINDING SITE FOR RESIDUE K A 461

Chain	Residue
A	U4
A	G107
A	U375
A	A376

site_id	FC4
Number of Residues	5
Details	BINDING SITE FOR RESIDUE K A 462

Chain	Residue
A	A67
A	G68
A	HOH506
A	HOH509
A	HOH614

site_id	FC5
Number of Residues	5
Details	BINDING SITE FOR RESIDUE K A 463

Chain	Residue
A	C116
A	G117
A	HOH635
A	HOH708
A	HOH746

site_id	FC6
Number of Residues	5
Details	BINDING SITE FOR RESIDUE K A 464

Chain	Residue
A	G275
A	HOH524
A	HOH725
A	HOH776
A	HOH786

site_id	FC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE K A 465

Chain	Residue
A	A27
A	G28
A	HOH489

site_id	FC8
Number of Residues	2
Details	BINDING SITE FOR RESIDUE K A 466

Chain	Residue
A	U251
A	G252

site_id	FC9
Number of Residues	3
Details	BINDING SITE FOR RESIDUE K A 467

Chain	Residue
A	A184
A	HOH497
A	HOH561

site_id	GC1
Number of Residues	3
Details	BINDING SITE FOR RESIDUE K A 468

Chain	Residue
A	A333
A	U334
A	G335

site_id	GC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE K A 469

Chain	Residue
A	G264
A	HOH525
A	HOH559
A	HOH916

site_id	GC3
Number of Residues	4
Details	BINDING SITE FOR RESIDUE K A 470

Chain	Residue
A	A297
A	G320
A	HOH558
A	HOH785

site_id	GC4
Number of Residues	3
Details	BINDING SITE FOR RESIDUE K A 471

Chain	Residue
A	A283
A	HOH592
A	HOH728

site_id	GC5
Number of Residues	5
Details	BINDING SITE FOR RESIDUE K A 472

Chain	Residue
A	A192
A	A193
A	G194
A	HOH545
A	HOH623

site_id	GC6
Number of Residues	1
Details	BINDING SITE FOR RESIDUE K A 473

Chain	Residue
A	G142

site_id	GC7
Number of Residues	5
Details	BINDING SITE FOR RESIDUE K A 474

Chain	Residue
A	C86
A	G87
A	A95
A	U96
A	G97

site_id	GC8
Number of Residues	4
Details	BINDING SITE FOR RESIDUE K A 475

Chain	Residue
A	G3
A	U4
A	G5
A	A376

site_id	GC9
Number of Residues	2
Details	BINDING SITE FOR RESIDUE K A 476

Chain	Residue
A	G79
A	G80

site_id	HC1
Number of Residues	5
Details	BINDING SITE FOR RESIDUE K A 477

Chain	Residue
A	G32
A	A33
A	G34
A	A50
A	HOH496

site_id	HC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE K A 478

Chain	Residue
A	G229
A	HOH641

site_id	HC3
Number of Residues	4
Details	BINDING SITE FOR RESIDUE K A 479

Chain	Residue
A	A370
A	HOH648
A	HOH774
A	HOH789

site_id	HC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE K A 480

Chain	Residue
A	G288
A	C358
A	G359
A	C377

site_id	HC5
Number of Residues	6
Details	BINDING SITE FOR RESIDUE K A 481

Chain	Residue
A	G331
A	U332
A	HOH490
A	HOH494
A	HOH570
A	HOH722

site_id	HC6
Number of Residues	5
Details	BINDING SITE FOR RESIDUE K A 482

Chain	Residue
A	A348
A	A349
A	G350
A	HOH571
A	HOH751

site_id	HC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE K A 483

Chain	Residue
A	A120
A	A121
A	HOH705

site_id	HC8
Number of Residues	3
Details	BINDING SITE FOR RESIDUE K A 484

Chain	Residue
A	A154
A	G155
A	HOH556

site_id	HC9
Number of Residues	3
Details	BINDING SITE FOR RESIDUE K A 485

Chain	Residue
A	G89
A	HOH682
A	HOH843

site_id	IC1
Number of Residues	3
Details	BINDING SITE FOR RESIDUE K A 486

Chain	Residue
A	G58
A	HOH775
A	HOH797

225946

PDB entries from 2024-10-09

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