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3G5P

Structure and activity of human mitochondrial peptide deformylase, a novel cancer target

Functional Information from GO Data
ChainGOidnamespacecontents
A0042586molecular_functionpeptide deformylase activity
B0042586molecular_functionpeptide deformylase activity
C0042586molecular_functionpeptide deformylase activity
D0042586molecular_functionpeptide deformylase activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CO C 1
ChainResidue
CGLN57
CCYS114
CHIS156
CHIS160
CPO4187

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CO D 2
ChainResidue
DPO4187
DGLN57
DCYS114
DHIS156
DHIS160

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CO A 186
ChainResidue
APO42
AGLN57
ACYS114
AHIS156
AHIS160

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CO B 186
ChainResidue
BGLN57
BCYS114
BHIS156
BHIS160
BPO4188

site_idAC5
Number of Residues9
DetailsBINDING SITE FOR RESIDUE PO4 A 1
ChainResidue
APO42
ACYS50
AVAL51
AGLY52
AILE153
AHOH323
AHOH342
AHOH359
AHOH391

site_idAC6
Number of Residues11
DetailsBINDING SITE FOR RESIDUE PO4 A 2
ChainResidue
APO41
AGLY52
ALEU53
AGLN57
ACYS114
AGLU115
AHIS156
AGLU157
AHIS160
ACO186
AHOH342

site_idAC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE PO4 B 187
ChainResidue
BCYS50
BVAL51
BGLY52
BILE153
BPO4188
BHOH317
BHOH319
BHOH347

site_idAC8
Number of Residues11
DetailsBINDING SITE FOR RESIDUE PO4 B 188
ChainResidue
BGLY52
BLEU53
BGLN57
BCYS114
BGLU115
BHIS156
BGLU157
BHIS160
BCO186
BPO4187
BHOH317

site_idAC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE PO4 C 186
ChainResidue
CCYS50
CVAL51
CGLY52
CPO4187
CHOH302
CHOH328
CHOH335

site_idBC1
Number of Residues11
DetailsBINDING SITE FOR RESIDUE PO4 C 187
ChainResidue
CCO1
CGLY52
CLEU53
CGLN57
CCYS114
CGLU115
CHIS156
CGLU157
CHIS160
CPO4186
CHOH328

site_idBC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE PO4 D 186
ChainResidue
DCYS50
DVAL51
DGLY52
DPO4187
DHOH275
DHOH321
DHOH322

site_idBC3
Number of Residues11
DetailsBINDING SITE FOR RESIDUE PO4 D 187
ChainResidue
DCO2
DGLY52
DLEU53
DGLN57
DCYS114
DGLU115
DHIS156
DGLU157
DHIS160
DPO4186
DHOH321

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsACT_SITE: ACT_SITE => ECO:0000250|UniProtKB:P0A6K3
ChainResidueDetails
AGLU157
BGLU157
CGLU157
DGLU157

site_idSWS_FT_FI2
Number of Residues24
DetailsBINDING: BINDING => ECO:0000269|PubMed:19236878
ChainResidueDetails
AGLY13
BCYS114
BHIS156
BHIS160
CGLY13
CPRO111
CGLY113
CCYS114
CHIS156
CHIS160
DGLY13
APRO111
DPRO111
DGLY113
DCYS114
DHIS156
DHIS160
AGLY113
ACYS114
AHIS156
AHIS160
BGLY13
BPRO111
BGLY113

222036

PDB entries from 2024-07-03

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