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3G2C

Mth0212 in complex with a short ssDNA (CGTA)

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003824molecular_functioncatalytic activity
A0003906molecular_functionDNA-(apurinic or apyrimidinic site) endonuclease activity
A0004518molecular_functionnuclease activity
A0004519molecular_functionendonuclease activity
A0006281biological_processDNA repair
A0006284biological_processbase-excision repair
A0006974biological_processDNA damage response
A0008081molecular_functionphosphoric diester hydrolase activity
A0008311molecular_functiondouble-stranded DNA 3'-5' DNA exonuclease activity
A0016787molecular_functionhydrolase activity
A0016829molecular_functionlyase activity
A0046872molecular_functionmetal ion binding
A0140078molecular_functionclass I DNA-(apurinic or apyrimidinic site) endonuclease activity
B0003677molecular_functionDNA binding
B0003824molecular_functioncatalytic activity
B0003906molecular_functionDNA-(apurinic or apyrimidinic site) endonuclease activity
B0004518molecular_functionnuclease activity
B0004519molecular_functionendonuclease activity
B0006281biological_processDNA repair
B0006284biological_processbase-excision repair
B0006974biological_processDNA damage response
B0008081molecular_functionphosphoric diester hydrolase activity
B0008311molecular_functiondouble-stranded DNA 3'-5' DNA exonuclease activity
B0016787molecular_functionhydrolase activity
B0016829molecular_functionlyase activity
B0046872molecular_functionmetal ion binding
B0140078molecular_functionclass I DNA-(apurinic or apyrimidinic site) endonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 266
ChainResidue
ATRP9
ALYS20
AGLY21
APHE22
AMET244
AHOH318

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 267
ChainResidue
ALEU240
AVAL243
AHOH339
AHOH375
ATRP25
AGLU28
AGLU29

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE GOL A 268
ChainResidue
AARG57
AASP242

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE GOL A 269
ChainResidue
AHOH302
AHOH368

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 270
ChainResidue
AGLU158
AILE159
ALEU161
APRO164
APRO200
AHOH337
AHOH358

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG A 271
ChainResidue
AASN12
AGLU38
APO4272

site_idAC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE PO4 A 272
ChainResidue
AASN10
AGLU38
ATYR111
AASN114
AASP151
AASN153
AHIS248
AMG271

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PO4 A 273
ChainResidue
AARG157
AGLU158
AARG178

site_idAC9
Number of Residues1
DetailsBINDING SITE FOR RESIDUE GOL A 274
ChainResidue
APHE86

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG B 266
ChainResidue
BASN12
BGLU38
BPO4267

site_idBC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE PO4 B 267
ChainResidue
BASN10
BGLU38
BTYR111
BASN114
BASP151
BASN153
BHIS248
BMG266

site_idBC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE GOL I 5
ChainResidue
BTHR210
IDC1

Functional Information from PROSITE/UniProt
site_idPS00726
Number of Residues10
DetailsAP_NUCLEASE_F1_1 AP endonucleases family 1 signature 1. PDILCLQEIK
ChainResidueDetails
APRO31-LYS40

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton donor/acceptor => ECO:0000305|PubMed:20434457
ChainResidueDetails
AASP151
BASP151

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:20434457, ECO:0000269|Ref.7
ChainResidueDetails
AASN12
AGLU38
BASN12
BGLU38

site_idSWS_FT_FI3
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:20434457
ChainResidueDetails
AASP151
AASN153
AHIS248
BASP151
BASN153
BHIS248

218853

PDB entries from 2024-04-24

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