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3G1Y

Crystal structure of the mutant D70N of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with sulfate

Functional Information from GO Data
ChainGOidnamespacecontents
A0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
A0005829cellular_componentcytosol
A0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
A0006221biological_processpyrimidine nucleotide biosynthetic process
A0016831molecular_functioncarboxy-lyase activity
A0044205biological_process'de novo' UMP biosynthetic process
B0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
B0005829cellular_componentcytosol
B0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
B0006221biological_processpyrimidine nucleotide biosynthetic process
B0016831molecular_functioncarboxy-lyase activity
B0044205biological_process'de novo' UMP biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 A 229
ChainResidue
ALYS42
AASN70
ALYS72
AHOH290
AHOH326
AHOH335
BASP75
BILE76
BHOH232

site_idAC2
Number of Residues10
DetailsBINDING SITE FOR RESIDUE SO4 B 229
ChainResidue
AASP75
AILE76
AHOH233
BLYS42
BASN70
BLYS72
BHOH233
BHOH292
BHOH327
BHOH337

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton donor
ChainResidueDetails
ALYS72
BLYS72

site_idSWS_FT_FI2
Number of Residues14
DetailsBINDING:
ChainResidueDetails
AASP20
BASN70
BSER127
BPRO180
BGLY202
BARG203
ALYS42
AASN70
ASER127
APRO180
AGLY202
AARG203
BASP20
BLYS42

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1dbt
ChainResidueDetails
ALYS72
AASN70

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1dbt
ChainResidueDetails
BLYS72
BASN70

site_idCSA3
Number of Residues4
DetailsAnnotated By Reference To The Literature 1dbt
ChainResidueDetails
ALYS42
AASP75
ALYS72
AASN70

site_idCSA4
Number of Residues4
DetailsAnnotated By Reference To The Literature 1dbt
ChainResidueDetails
BLYS42
BASP75
BLYS72
BASN70

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PDB entries from 2024-11-13

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