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3G0T

Crystal structure of putative aspartate aminotransferase (NP_905498.1) from Porphyromonas gingivalis W83 at 1.75 A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0008483molecular_functiontransaminase activity
A0009058biological_processbiosynthetic process
A0030170molecular_functionpyridoxal phosphate binding
B0008483molecular_functiontransaminase activity
B0009058biological_processbiosynthetic process
B0030170molecular_functionpyridoxal phosphate binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA A 437
ChainResidue
AHIS234
AGLU237
ALEU239
AHOH851
AHOH861

site_idAC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL A 438
ChainResidue
AARG150

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 439
ChainResidue
AHOH669
AHOH840
AHOH982
BHOH1059
ATRP316
AALA320
AHOH626

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 440
ChainResidue
ASER75
AILE76
AHOH770
AHOH983
BPRO53
BLEU55

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 441
ChainResidue
AASP249
AASN250
ALYS276
ALEU277
AARG280
AHOH561
AHOH708

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 442
ChainResidue
AASP231
AASP360
AHOH1024

site_idAC7
Number of Residues9
DetailsBINDING SITE FOR RESIDUE EDO A 443
ChainResidue
AASN125
AARG131
ATYR133
AGLY134
AGLN154
ACYS183
AHOH582
AHOH761
AHOH850

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 444
ChainResidue
AGLY54
ATYR339
ALYS342
ASER415
AHOH1039
AHOH1067

site_idAC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 445
ChainResidue
APRO53
AGLY54
ALEU55
AHOH688
BSER75
BILE76
BHOH718

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 446
ChainResidue
AASN246
ATYR247
ALYS378
AHOH1130

site_idBC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 447
ChainResidue
AASP327
AHOH494
AHOH1187

site_idBC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 448
ChainResidue
APHE162
AGLN196
ATYR359
AASP360
ALYS361
AHOH1070

site_idBC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA B 437
ChainResidue
BHIS234
BGLU237
BLEU239
BHOH977
BHOH978

site_idBC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL B 438
ChainResidue
BARG150

site_idBC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PE4 B 439
ChainResidue
BGLN59
BGLU63
BTHR64
BHOH1143
BHOH1144
BHOH1145

site_idBC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE PE4 B 440
ChainResidue
BASP101
BILE102
BPRO103
BGLY275
BHOH691
BHOH801
BHOH975
BHOH1067

site_idBC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 441
ChainResidue
BASP249
BASN250
BLEU277
BARG280
BHOH585
BHOH986

site_idBC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO B 442
ChainResidue
BSER233
BHIS234
BPRO235
BASN331

site_idCC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO B 443
ChainResidue
BILE27
BGLU49
BGLY51
BARG411
BHOH1055

site_idCC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO B 444
ChainResidue
BASN125
BARG131
BTYR133
BGLN154
BCYS183
BHOH1002
BHOH1202

site_idCC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 445
ChainResidue
BTRP316
BALA320
BLYS323
BHOH867
BHOH969
BHOH1026

site_idCC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 446
ChainResidue
BASP200
BASN246
BTYR247
BHOH510
BHOH673
BHOH989

site_idCC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO B 447
ChainResidue
BPHE162
BGLN196
BTYR359
BASP360
BLYS361

site_idCC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO B 448
ChainResidue
AGLY290
AHOH1007
BARG150

site_idCC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO B 449
ChainResidue
BGLU157
BTHR179
BPHE182
BHOH1162

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1ay4
ChainResidueDetails
APHE142
AASP220

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1ay4
ChainResidueDetails
BPHE142
BASP220

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PDB entries from 2024-07-31

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