3FMG

Structure of rotavirus outer capsid protein VP7 trimer in complex with a neutralizing Fab

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0019028	cellular_component	viral capsid
A	0039621	cellular_component	T=13 icosahedral viral capsid
A	0039624	cellular_component	viral outer capsid
A	0044165	cellular_component	host cell endoplasmic reticulum
A	0044166	cellular_component	host cell endoplasmic reticulum lumen
A	0046813	biological_process	receptor-mediated virion attachment to host cell
A	0046872	molecular_function	metal ion binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	6
Details	BINDING SITE FOR RESIDUE CA A 327

Chain	Residue
A	GLN177
A	LYS183
A	ASP228
A	VAL229
A	ASP231
A	ASP301

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site_id	AC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE CA A 328

Chain	Residue
A	GLU216
A	ASP95
A	GLY206
A	THR214

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Functional Information from PROSITE/UniProt

site_id	PS00290
Number of Residues	7
Details	IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YTCEATH

Chain	Residue	Details
L	TYR192-HIS198

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Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	6
Details	BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_04131, ECO:0000269|PubMed:19520960

Chain	Residue	Details
A	ASP95
A	GLN177
A	GLY206
A	ASP228
A	VAL229
A	ASP301

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site_id	SWS_FT_FI2
Number of Residues	3
Details	BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_04131, ECO:0000269|PubMed:19487668, ECO:0000269|PubMed:19520960

Chain	Residue	Details
A	THR214
A	GLU216
A	ASP231

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site_id	SWS_FT_FI3
Number of Residues	1
Details	CARBOHYD: N-linked (GlcNAc...) asparagine; by host => ECO:0000269|PubMed:19487668, ECO:0000269|PubMed:21157433

Chain	Residue	Details
A	ASN69

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