3FHK
Crystal structure of APC1446, B.subtilis YphP disulfide isomerase
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003756 | molecular_function | protein disulfide isomerase activity |
A | 0006979 | biological_process | response to oxidative stress |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0033194 | biological_process | response to hydroperoxide |
A | 0045454 | biological_process | cell redox homeostasis |
D | 0003756 | molecular_function | protein disulfide isomerase activity |
D | 0006979 | biological_process | response to oxidative stress |
D | 0016491 | molecular_function | oxidoreductase activity |
D | 0033194 | biological_process | response to hydroperoxide |
D | 0045454 | biological_process | cell redox homeostasis |
E | 0003756 | molecular_function | protein disulfide isomerase activity |
E | 0006979 | biological_process | response to oxidative stress |
E | 0016491 | molecular_function | oxidoreductase activity |
E | 0033194 | biological_process | response to hydroperoxide |
E | 0045454 | biological_process | cell redox homeostasis |
F | 0003756 | molecular_function | protein disulfide isomerase activity |
F | 0006979 | biological_process | response to oxidative stress |
F | 0016491 | molecular_function | oxidoreductase activity |
F | 0033194 | biological_process | response to hydroperoxide |
F | 0045454 | biological_process | cell redox homeostasis |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 D 145 |
Chain | Residue |
D | GLN85 |
D | LYS87 |
D | GLU88 |
D | HOH154 |
D | HOH170 |
site_id | AC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SO4 A 145 |
Chain | Residue |
A | HOH162 |
A | HOH203 |
A | GLN85 |
A | ASP86 |
A | LYS87 |
A | GLU88 |
site_id | AC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SO4 A 146 |
Chain | Residue |
A | ALA83 |
A | ARG94 |
A | SER104 |
A | HOH170 |
A | HOH173 |
A | HOH225 |
site_id | AC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SO4 E 145 |
Chain | Residue |
D | LYS87 |
D | HOH175 |
E | CYS53 |
E | GLY54 |
E | CYS55 |
E | ARG121 |
site_id | AC5 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE SO4 E 146 |
Chain | Residue |
E | ARG94 |
E | SER104 |
site_id | AC6 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 D 146 |
Chain | Residue |
D | CYS53 |
D | GLY54 |
D | CYS55 |
D | ARG121 |
E | LYS87 |
site_id | AC7 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 E 147 |
Chain | Residue |
E | GLN85 |
E | LYS87 |
E | GLU88 |
E | HOH154 |
E | HOH179 |
site_id | AC8 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SO4 A 147 |
Chain | Residue |
A | VAL116 |
A | HIS117 |
A | HIS143 |
A | HOH182 |
A | HOH187 |
E | SER-2 |
site_id | AC9 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 F 145 |
Chain | Residue |
E | ASP72 |
E | LYS73 |
E | HOH172 |
E | HOH185 |
F | GLY84 |
F | ARG94 |
F | HOH167 |
F | HOH171 |
site_id | BC1 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 D 147 |
Chain | Residue |
D | ARG94 |
D | SER104 |
D | HOH195 |
site_id | BC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 F 146 |
Chain | Residue |
F | ASP86 |
F | LYS87 |
F | GLU88 |
site_id | BC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SO4 F 147 |
Chain | Residue |
D | ARG18 |
D | THR21 |
F | CYS53 |
F | GLY54 |
F | ARG121 |
F | HOH155 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 8 |
Details | ACT_SITE: Nucleophile => ECO:0000269|PubMed:24313874 |
Chain | Residue | Details |
A | CYS53 | |
A | CYS55 | |
D | CYS53 | |
D | CYS55 | |
E | CYS53 | |
E | CYS55 | |
F | CYS53 | |
F | CYS55 |
site_id | SWS_FT_FI2 |
Number of Residues | 4 |
Details | MOD_RES: S-bacillithiol cysteine disulfide => ECO:0000269|PubMed:24313874 |
Chain | Residue | Details |
A | CYS53 | |
D | CYS53 | |
E | CYS53 | |
F | CYS53 |