Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3F7T

Structure of active IspH shows a novel fold with a [3Fe-4S] cluster in the catalytic centre

Functional Information from GO Data
ChainGOidnamespacecontents
A0005829cellular_componentcytosol
A0008299biological_processisoprenoid biosynthetic process
A0016114biological_processterpenoid biosynthetic process
A0016491molecular_functionoxidoreductase activity
A0019288biological_processisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
A0042380molecular_functionhydroxymethylbutenyl pyrophosphate reductase activity
A0046872molecular_functionmetal ion binding
A0050992biological_processdimethylallyl diphosphate biosynthetic process
A0051538molecular_function3 iron, 4 sulfur cluster binding
A0051539molecular_function4 iron, 4 sulfur cluster binding
A0051745molecular_function4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity
B0005829cellular_componentcytosol
B0008299biological_processisoprenoid biosynthetic process
B0016114biological_processterpenoid biosynthetic process
B0016491molecular_functionoxidoreductase activity
B0019288biological_processisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
B0042380molecular_functionhydroxymethylbutenyl pyrophosphate reductase activity
B0046872molecular_functionmetal ion binding
B0050992biological_processdimethylallyl diphosphate biosynthetic process
B0051538molecular_function3 iron, 4 sulfur cluster binding
B0051539molecular_function4 iron, 4 sulfur cluster binding
B0051745molecular_function4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE F3S A 999
ChainResidue
ACYS12
AGLY14
ACYS96
ATHR167
ACYS197

site_idAC2
Number of Residues11
DetailsBINDING SITE FOR RESIDUE POP A 998
ChainResidue
ATHR168
AASN224
ASER225
ASER226
AASN227
ASER269
AHOH467
AVAL40
AHIS41
AHIS74
AHIS124

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PO4 A 901
ChainResidue
AASN7
AARG9
APRO292

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE PO4 A 902
ChainResidue
AARG36
AGLU58
AGLN59
AILE60
AVAL80
AGLU83
AHOH350

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PO4 A 904
ChainResidue
AARG108
AARG111
AARG112

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE PO4 A 905
ChainResidue
AGLN252
AGLU253

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE F3S B 999
ChainResidue
BCYS12
BCYS96
BLEU98
BTHR167
BCYS197
BHOH667

site_idAC8
Number of Residues13
DetailsBINDING SITE FOR RESIDUE POP B 998
ChainResidue
BVAL40
BHIS41
BHIS74
BHIS124
BTHR168
BASN224
BSER225
BSER226
BASN227
BSER269
BHOH397
BHOH514
BHOH667

site_idAC9
Number of Residues9
DetailsBINDING SITE FOR RESIDUE PO4 B 903
ChainResidue
ALYS101
APRO191
BPRO191
BARG192
BHOH321
BHOH388
BHOH495
BHOH529
BHOH539

site_idBC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PO4 B 906
ChainResidue
BASN7
BARG9
BPRO292
BHOH430
BHOH638

site_idBC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE PO4 B 907
ChainResidue
BARG81
BLYS85

site_idBC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE PO4 B 908
ChainResidue
BASN157
BHOH481

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton donor => ECO:0000305|PubMed:22137895, ECO:0000305|PubMed:22687151
ChainResidueDetails
AGLU126
BGLU126

site_idSWS_FT_FI2
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:20080550, ECO:0000269|PubMed:22137895, ECO:0000269|PubMed:22687151, ECO:0000269|PubMed:22948824, ECO:0000269|PubMed:23307751, ECO:0007744|PDB:3KE8, ECO:0007744|PDB:3SZL, ECO:0007744|PDB:3URK, ECO:0007744|PDB:4EB3, ECO:0007744|PDB:4H4C
ChainResidueDetails
ACYS12
ACYS96
ACYS197
BCYS12
BCYS96
BCYS197

site_idSWS_FT_FI3
Number of Residues12
DetailsBINDING: BINDING => ECO:0000269|PubMed:20080550, ECO:0000269|PubMed:22137895, ECO:0000305|PubMed:22687151, ECO:0007744|PDB:3KE8, ECO:0007744|PDB:3SZL, ECO:0007744|PDB:4EB3
ChainResidueDetails
AHIS41
BTHR167
BSER225
BSER269
AHIS74
AHIS124
ATHR167
ASER225
ASER269
BHIS41
BHIS74
BHIS124

222036

PDB entries from 2024-07-03

PDB statisticsPDBj update infoContact PDBjnumon