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3F47

The Crystal Structure of [Fe]-Hydrogenase (Hmd) Holoenzyme from Methanocaldococcus jannaschii

Functional Information from GO Data
ChainGOidnamespacecontents
A0004735molecular_functionpyrroline-5-carboxylate reductase activity
A0006730biological_processone-carbon metabolic process
A0015948biological_processmethanogenesis
A0016491molecular_functionoxidoreductase activity
A0019386biological_processmethanogenesis, from carbon dioxide
A0047068molecular_functionN5,N10-methenyltetrahydromethanopterin hydrogenase activity
A0055129biological_processL-proline biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues30
DetailsBINDING SITE FOR RESIDUE I2C A 359
ChainResidue
ALEU6
APRO115
ACYS118
AASP135
ATRP148
ALEU149
APRO150
AILE158
AALA175
ACYS176
ATHR177
AGLY7
APRO202
AFE2360
ACMO361
ACMO362
AHOH364
AHOH373
AHOH385
AHOH404
AHOH471
AHOH487
AGLY9
AHOH493
ACYS10
ATHR13
ASER63
AASP64
APRO65
APRO114

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE FE2 A 360
ChainResidue
ACYS176
AI2C359
ACMO361
ACMO362
AHOH364

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CMO A 361
ChainResidue
ATRP148
ACYS204
AVAL205
APRO206
AI2C359
AFE2360
ACMO362

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE CMO A 362
ChainResidue
ACYS176
AHIS201
APRO202
ACYS204
AI2C359
AFE2360
ACMO361
AHOH364

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA A 363
ChainResidue
ALEU51
AVAL54
APRO55
AVAL57

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PDB entries from 2024-10-30

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