3EZK
Bacteriophage T4 gp17 motor assembly based on crystal structures and cryo-EM reconstructions
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0004518 | molecular_function | nuclease activity |
| A | 0004519 | molecular_function | endonuclease activity |
| A | 0004536 | molecular_function | DNA nuclease activity |
| A | 0005524 | molecular_function | ATP binding |
| A | 0006259 | biological_process | DNA metabolic process |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0016887 | molecular_function | ATP hydrolysis activity |
| A | 0019072 | biological_process | viral genome packaging |
| A | 0019073 | biological_process | viral DNA genome packaging |
| A | 0046797 | biological_process | viral procapsid maturation |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0051276 | biological_process | chromosome organization |
| A | 0098009 | cellular_component | viral terminase, large subunit |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0004518 | molecular_function | nuclease activity |
| B | 0004519 | molecular_function | endonuclease activity |
| B | 0004536 | molecular_function | DNA nuclease activity |
| B | 0005524 | molecular_function | ATP binding |
| B | 0006259 | biological_process | DNA metabolic process |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0016887 | molecular_function | ATP hydrolysis activity |
| B | 0019072 | biological_process | viral genome packaging |
| B | 0019073 | biological_process | viral DNA genome packaging |
| B | 0046797 | biological_process | viral procapsid maturation |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0051276 | biological_process | chromosome organization |
| B | 0098009 | cellular_component | viral terminase, large subunit |
| C | 0000166 | molecular_function | nucleotide binding |
| C | 0004518 | molecular_function | nuclease activity |
| C | 0004519 | molecular_function | endonuclease activity |
| C | 0004536 | molecular_function | DNA nuclease activity |
| C | 0005524 | molecular_function | ATP binding |
| C | 0006259 | biological_process | DNA metabolic process |
| C | 0016787 | molecular_function | hydrolase activity |
| C | 0016887 | molecular_function | ATP hydrolysis activity |
| C | 0019072 | biological_process | viral genome packaging |
| C | 0019073 | biological_process | viral DNA genome packaging |
| C | 0046797 | biological_process | viral procapsid maturation |
| C | 0046872 | molecular_function | metal ion binding |
| C | 0051276 | biological_process | chromosome organization |
| C | 0098009 | cellular_component | viral terminase, large subunit |
| D | 0000166 | molecular_function | nucleotide binding |
| D | 0004518 | molecular_function | nuclease activity |
| D | 0004519 | molecular_function | endonuclease activity |
| D | 0004536 | molecular_function | DNA nuclease activity |
| D | 0005524 | molecular_function | ATP binding |
| D | 0006259 | biological_process | DNA metabolic process |
| D | 0016787 | molecular_function | hydrolase activity |
| D | 0016887 | molecular_function | ATP hydrolysis activity |
| D | 0019072 | biological_process | viral genome packaging |
| D | 0019073 | biological_process | viral DNA genome packaging |
| D | 0046797 | biological_process | viral procapsid maturation |
| D | 0046872 | molecular_function | metal ion binding |
| D | 0051276 | biological_process | chromosome organization |
| D | 0098009 | cellular_component | viral terminase, large subunit |
| E | 0000166 | molecular_function | nucleotide binding |
| E | 0004518 | molecular_function | nuclease activity |
| E | 0004519 | molecular_function | endonuclease activity |
| E | 0004536 | molecular_function | DNA nuclease activity |
| E | 0005524 | molecular_function | ATP binding |
| E | 0006259 | biological_process | DNA metabolic process |
| E | 0016787 | molecular_function | hydrolase activity |
| E | 0016887 | molecular_function | ATP hydrolysis activity |
| E | 0019072 | biological_process | viral genome packaging |
| E | 0019073 | biological_process | viral DNA genome packaging |
| E | 0046797 | biological_process | viral procapsid maturation |
| E | 0046872 | molecular_function | metal ion binding |
| E | 0051276 | biological_process | chromosome organization |
| E | 0098009 | cellular_component | viral terminase, large subunit |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 320 |
| Details | Region: {"description":"ssDNA-binding","evidences":[{"source":"HAMAP-Rule","id":"MF_04146","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"9533879","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 850 |
| Details | Region: {"description":"ATPase activity","evidences":[{"source":"HAMAP-Rule","id":"MF_04146","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"12235385","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 120 |
| Details | Region: {"description":"Binding to the portal protein","evidences":[{"source":"HAMAP-Rule","id":"MF_04146","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"22345478","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 995 |
| Details | Region: {"description":"Nuclease activity","evidences":[{"source":"HAMAP-Rule","id":"MF_04146","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"12235385","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 30 |
| Details | Motif: {"description":"Walker A motif","evidences":[{"source":"HAMAP-Rule","id":"MF_04146","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"11846554","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12235385","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 25 |
| Details | Motif: {"description":"Walker B motif","evidences":[{"source":"HAMAP-Rule","id":"MF_04146","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"12235385","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 10 |
| Details | Motif: {"description":"ATPase coupling","evidences":[{"source":"HAMAP-Rule","id":"MF_04146","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"12235385","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 5 |
| Details | Active site: {"description":"For ATPase activity","evidences":[{"source":"HAMAP-Rule","id":"MF_04146","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"12875841","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17386269","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 15 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_04146","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"17386269","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 15 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_04146","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"18627466","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"19109896","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI11 |
| Number of Residues | 5 |
| Details | Site: {"description":"Modulates nuclease activity","evidences":[{"source":"HAMAP-Rule","id":"MF_04146","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"18627466","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
