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3ESR

Crystal Structure of D,D-heptose1.7-bisphosphate phosphatase from E. coli in complex with calcium and phosphate

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0005975biological_processcarbohydrate metabolic process
A0008270molecular_functionzinc ion binding
A0009103biological_processlipopolysaccharide biosynthetic process
A0009244biological_processlipopolysaccharide core region biosynthetic process
A0016787molecular_functionhydrolase activity
A0016791molecular_functionphosphatase activity
A0034200molecular_functionD-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase activity
A0046872molecular_functionmetal ion binding
A0097171biological_processADP-L-glycero-beta-D-manno-heptose biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 212
ChainResidue
ACYS112
AHIS114
ACYS127
ACYS129

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA A 213
ChainResidue
AASP31
AASP33
AASP156
APO4214
AHOH304

site_idAC3
Number of Residues9
DetailsBINDING SITE FOR RESIDUE PO4 A 214
ChainResidue
AASP31
AARG32
AASP33
ATHR73
AASN74
ALYS131
ACA213
AHOH243
AHOH316

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Nucleophile => ECO:0000269|PubMed:20050699
ChainResidueDetails
AASP31

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: Proton donor => ECO:0000269|PubMed:20050614, ECO:0000269|PubMed:20050699
ChainResidueDetails
AASP33

site_idSWS_FT_FI3
Number of Residues10
DetailsBINDING: BINDING => ECO:0000269|PubMed:20050614
ChainResidueDetails
AASP31
ALYS157
AASP33
AASP39
ACYS112
AHIS114
ACYS127
ACYS129
AARG130
AASP156

site_idSWS_FT_FI4
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:20050614, ECO:0000269|PubMed:20050699
ChainResidueDetails
ATHR73

site_idSWS_FT_FI5
Number of Residues1
DetailsSITE: Stabilizes the phosphoryl group => ECO:0000269|PubMed:20050614, ECO:0000269|PubMed:20050699
ChainResidueDetails
ATHR73

site_idSWS_FT_FI6
Number of Residues1
DetailsSITE: Contributes to substrate recognition => ECO:0000269|PubMed:20050614
ChainResidueDetails
AARG130

site_idSWS_FT_FI7
Number of Residues1
DetailsSITE: Stabilizes the phosphoryl group => ECO:0000269|PubMed:20050614
ChainResidueDetails
ALYS131

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1lvh
ChainResidueDetails
AALA100
ALYS131

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1lvh
ChainResidueDetails
ALYS131
ATHR73

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PDB entries from 2024-07-24

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