3E7W
Crystal structure of DLTA: Implications for the reaction mechanism of non-ribosomal peptide synthetase (NRPS) adenylation domains
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0005524 | molecular_function | ATP binding |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0016874 | molecular_function | ligase activity |
| A | 0047473 | molecular_function | D-alanine [D-alanyl carrier protein] ligase activity |
| A | 0070395 | biological_process | lipoteichoic acid biosynthetic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE PO4 A 512 |
| Chain | Residue |
| A | THR13 |
| A | TYR14 |
| A | PRO15 |
| A | GLN16 |
| A | THR17 |
| A | GLN485 |
| A | ARG496 |
| site_id | AC2 |
| Number of Residues | 15 |
| Details | BINDING SITE FOR RESIDUE AMP A 513 |
| Chain | Residue |
| A | ASN291 |
| A | THR292 |
| A | TYR293 |
| A | GLY294 |
| A | THR296 |
| A | ASP382 |
| A | ARG396 |
| A | LYS402 |
| A | ARG407 |
| A | HOH661 |
| A | HOH767 |
| A | HOH815 |
| A | HOH831 |
| A | GLY269 |
| A | GLU270 |
Functional Information from PROSITE/UniProt
| site_id | PS00455 |
| Number of Residues | 12 |
| Details | AMP_BINDING Putative AMP-binding domain signature. IIYTSGSTGnPK |
| Chain | Residue | Details |
| A | ILE148-LYS159 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00593","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 6 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00593","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"18784082","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3E7W","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3E7X","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 1 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"18784082","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3E7W","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3E7X","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
