3E5P
Crystal structure of alanine racemase from E.faecalis
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003824 | molecular_function | catalytic activity |
A | 0005829 | cellular_component | cytosol |
A | 0006522 | biological_process | alanine metabolic process |
A | 0008784 | molecular_function | alanine racemase activity |
A | 0009252 | biological_process | peptidoglycan biosynthetic process |
A | 0016853 | molecular_function | isomerase activity |
A | 0030170 | molecular_function | pyridoxal phosphate binding |
A | 0030632 | biological_process | D-alanine biosynthetic process |
B | 0003824 | molecular_function | catalytic activity |
B | 0005829 | cellular_component | cytosol |
B | 0006522 | biological_process | alanine metabolic process |
B | 0008784 | molecular_function | alanine racemase activity |
B | 0009252 | biological_process | peptidoglycan biosynthetic process |
B | 0016853 | molecular_function | isomerase activity |
B | 0030170 | molecular_function | pyridoxal phosphate binding |
B | 0030632 | biological_process | D-alanine biosynthetic process |
C | 0003824 | molecular_function | catalytic activity |
C | 0005829 | cellular_component | cytosol |
C | 0006522 | biological_process | alanine metabolic process |
C | 0008784 | molecular_function | alanine racemase activity |
C | 0009252 | biological_process | peptidoglycan biosynthetic process |
C | 0016853 | molecular_function | isomerase activity |
C | 0030170 | molecular_function | pyridoxal phosphate binding |
C | 0030632 | biological_process | D-alanine biosynthetic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE PLP A 390 |
Chain | Residue |
A | LYS40 |
A | HOH431 |
A | TYR44 |
A | HIS169 |
A | ASN206 |
A | SER207 |
A | ARG222 |
A | GLY224 |
A | VAL225 |
A | TYR356 |
site_id | AC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE PPI A 400 |
Chain | Residue |
A | TYR267 |
A | TYR286 |
A | CYS313 |
A | MET314 |
C | TYR356 |
site_id | AC3 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE EPE A 430 |
Chain | Residue |
A | ARG292 |
A | HIS293 |
A | GLN295 |
A | ARG311 |
A | LYS350 |
C | GLU352 |
C | THR353 |
C | 2PE401 |
site_id | AC4 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE PLP B 390 |
Chain | Residue |
B | LYS40 |
B | TYR44 |
B | ARG139 |
B | HIS169 |
B | ASN206 |
B | SER207 |
B | ARG222 |
B | GLY224 |
B | VAL225 |
B | TYR356 |
B | HOH402 |
B | HOH403 |
site_id | AC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE PPI B 400 |
Chain | Residue |
B | TYR267 |
B | TYR286 |
B | ILE354 |
B | TYR356 |
B | HOH422 |
site_id | AC6 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE 2PE C 401 |
Chain | Residue |
A | HIS293 |
A | LYS350 |
A | LEU351 |
A | GLU352 |
A | ILE354 |
A | EPE430 |
C | ARG292 |
C | HIS293 |
C | GLN295 |
C | ARG311 |
C | LYS350 |
C | GLU352 |
site_id | AC7 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE PLP C 390 |
Chain | Residue |
C | VAL38 |
C | LYS40 |
C | TYR44 |
C | LEU86 |
C | HIS169 |
C | ASN206 |
C | SER207 |
C | ARG222 |
C | GLY224 |
C | VAL225 |
C | TYR356 |
C | HOH425 |
site_id | AC8 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE PPI C 400 |
Chain | Residue |
C | TYR267 |
C | TYR286 |
C | CYS313 |
C | MET314 |
Functional Information from PROSITE/UniProt
site_id | PS00395 |
Number of Residues | 11 |
Details | ALANINE_RACEMASE Alanine racemase pyridoxal-phosphate attachment site. AVvKANGYGHG |
Chain | Residue | Details |
A | ALA37-GLY47 |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1bd0 |
Chain | Residue | Details |
A | LYS40 | |
A | ARG139 |
site_id | CSA2 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1bd0 |
Chain | Residue | Details |
B | LYS40 | |
B | ARG139 |
site_id | CSA3 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1bd0 |
Chain | Residue | Details |
C | LYS40 | |
C | ARG139 |
site_id | CSA4 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1bd0 |
Chain | Residue | Details |
A | CYS313 | |
A | TYR267 |
site_id | CSA5 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1bd0 |
Chain | Residue | Details |
B | CYS313 | |
B | TYR267 |
site_id | CSA6 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1bd0 |
Chain | Residue | Details |
C | CYS313 | |
C | TYR267 |