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3DZ3

Human AdoMetDC F223A mutant with covalently bound S-Adenosylmethionine methyl ester

Functional Information from GO Data
ChainGOidnamespacecontents
A0004014molecular_functionadenosylmethionine decarboxylase activity
A0006597biological_processspermine biosynthetic process
A0008295biological_processspermidine biosynthetic process
B0004014molecular_functionadenosylmethionine decarboxylase activity
B0008295biological_processspermidine biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE PUT B 350
ChainResidue
APHE111
AASP174
ATHR176
ATYR318
AHOH378
BLEU13
BGLU15

site_idAC2
Number of Residues17
DetailsBINDING SITE FOR RESIDUE SMM A 368
ChainResidue
ACYS82
ACYS226
AGLY227
ATYR228
ASER229
AHIS243
AILE244
ATHR245
APRO246
AGLU247
AHOH400
BPHE7
BLEU65
BSER66
BGLU67
APYR68
ASER69

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"evidences":[{"source":"PubMed","id":"1917972","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"11583147","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsActive site: {"description":"Proton donor; for catalytic activity","evidences":[{"source":"PubMed","id":"10029540","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"11583147","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsActive site: {"description":"Proton acceptor; for processing activity","evidences":[{"source":"PubMed","id":"11583147","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idMCSA1
Number of Residues3
DetailsM-CSA 575
ChainResidueDetails
BSER19proton shuttle (general acid/base)

246031

PDB entries from 2025-12-10

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